Create a pipeline from a template and test it

Retrieving module information of input and output and EDAM ontology from bio.tools #3358

Triggered via pull request January 21, 2025 15:29

mirpedrol

opened #3418

mirpedrol:get-edam-ontology

Status Failure

Total duration 3m 15s

Artifacts –

create-test-lint-wf-template.yml

on: pull_request

Retrieve all template features

Matrix: RunTestWorkflow

Annotations

22 errors and 45 warnings

RunTestWorkflow (all, ubuntu-latest, docker)

Process completed with exit code 1.

RunTestWorkflow (modules, ubuntu-latest, self_hosted_runner)

Process completed with exit code 1.

RunTestWorkflow (fastqc, ubuntu-latest, self_hosted_runner)

Process completed with exit code 1.

RunTestWorkflow (multiqc, ubuntu-latest, self_hosted_runner)

Process completed with exit code 1.

RunTestWorkflow (code_linters, ubuntu-latest, self_hosted_runner)

Process completed with exit code 1.

RunTestWorkflow (gitpod, ubuntu-latest, self_hosted_runner)

Process completed with exit code 1.

RunTestWorkflow (ci, ubuntu-latest, self_hosted_runner)

Process completed with exit code 1.

RunTestWorkflow (citations, ubuntu-latest, self_hosted_runner)

Process completed with exit code 1.

RunTestWorkflow (changelog, ubuntu-latest, self_hosted_runner)

Process completed with exit code 1.

RunTestWorkflow (codespaces, ubuntu-latest, self_hosted_runner)

Process completed with exit code 1.

RunTestWorkflow (rocrate, ubuntu-latest, self_hosted_runner)

Process completed with exit code 1.

RunTestWorkflow (github_badges, ubuntu-latest, self_hosted_runner)

Process completed with exit code 1.

RunTestWorkflow (license, ubuntu-latest, self_hosted_runner)

Process completed with exit code 1.

RunTestWorkflow (adaptivecard, ubuntu-latest, self_hosted_runner)

Process completed with exit code 1.

RunTestWorkflow (nf_core_configs, ubuntu-latest, docker)

Process completed with exit code 1.

RunTestWorkflow (igenomes, ubuntu-latest, self_hosted_runner)

Process completed with exit code 1.

RunTestWorkflow (nf_schema, ubuntu-latest, self_hosted_runner)

Process completed with exit code 1.

RunTestWorkflow (email, ubuntu-latest, self_hosted_runner)

Process completed with exit code 1.

RunTestWorkflow (documentation, ubuntu-latest, self_hosted_runner)

Process completed with exit code 1.

RunTestWorkflow (seqera_platform, ubuntu-latest, self_hosted_runner)

Process completed with exit code 1.

RunTestWorkflow (slackreport, ubuntu-latest, self_hosted_runner)

Process completed with exit code 1.

RunTestWorkflow (vscode, ubuntu-latest, self_hosted_runner)

Process completed with exit code 1.

Retrieve all template features

ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636

RunTestWorkflow (all, ubuntu-latest, docker)

ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636

RunTestWorkflow (all, ubuntu-latest, docker)