Update conf/modules/align_sentieon.config

Co-authored-by: Felix Lenner <52530259+fellen31@users.noreply.github.com>
nf-core · Feb 12, 2025 · 32d2dc4 · 32d2dc4
1 parent de7b619
commit 32d2dc4
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/conf/modules/align_sentieon.config b/conf/modules/align_sentieon.config
@@ -36,7 +36,7 @@ process {
     }
 
     withName: '.*ALIGN:ALIGN_SENTIEON:SENTIEON_DEDUP' {
-        ext.args4 = { $params.rmdup ? "--rmdup" : '' }
+        ext.args4 = { params.rmdup ? "--rmdup" : '' }
         ext.prefix = { "${meta.id}_dedup.bam" }
         publishDir = [
             enabled: !params.save_mapped_as_cram,