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chore(deps): update condaforge/mambaforge docker tag to v24.9.2 #5561

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merged 14 commits into from
Nov 21, 2024
Merged

chore(deps): update condaforge/mambaforge docker tag to v24.9.2 #5561

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b24e877
chore(deps): update condaforge/mambaforge docker tag to v24.9.2
renovate[bot] Nov 15, 2024
c30e829
build: Clean up Dockerfile using ADD and LABEL
edmundmiller Nov 15, 2024
1bf10df
build: Add renovate comments
edmundmiller Nov 15, 2024
58dde7a
build: Add quarto to environment.yml
edmundmiller Nov 15, 2024
cf30aad
ci(#5833): Build for both amd64 and arm64
edmundmiller Nov 15, 2024
a92a3ca
Use latest quarto version
edmundmiller Nov 15, 2024
9bb7823
ci(#5833): Clean up naming and add platforms to Dockerfiles
edmundmiller Nov 16, 2024
3e57680
build(wave): Try removing sha256 for singularity builds
edmundmiller Nov 16, 2024
5a97e9b
style: Run lsp
edmundmiller Nov 16, 2024
597e9bf
build: Remove quarto
edmundmiller Nov 16, 2024
d1bf717
ci: Remove singularity from Dockerfile matrix
edmundmiller Nov 16, 2024
e5c5ffa
build: Switch to Seqera containers
edmundmiller Nov 16, 2024
ac55f03
test: Bump versions and use versions yaml
edmundmiller Nov 16, 2024
61d07b4
Merge branch 'master' into renovate/condaforge-mambaforge-24.x
edmundmiller Nov 21, 2024
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2 changes: 1 addition & 1 deletion modules/nf-core/quartonotebook/Dockerfile
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Expand Up @@ -18,7 +18,7 @@ RUN mkdir -p /opt/quarto \
#
# Second stage: Conda environment
#
FROM condaforge/mambaforge:24.1.2-0@sha256:64c45c1a743737f61cf201f54cae974b5c853be94f9c1a84f5e82e0e854f0407
FROM condaforge/mambaforge:24.9.2-0@sha256:e4edd160d0a10c6f577b127021d853b460e7e8c1bf1850c9aa4a52c4b8d9c8ee
COPY --from=quarto /opt/quarto /opt/quarto
ENV PATH="${PATH}:/opt/quarto/bin"

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