modify gprofiler2 snapshot to assert unstable png

nf-core · Jan 21, 2025 · d88df5d · d88df5d
1 parent d795904
commit d88df5d
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Showing 2 changed files with 24 additions and 36 deletions.
diff --git a/modules/nf-core/gprofiler2/gost/tests/main.nf.test b/modules/nf-core/gprofiler2/gost/tests/main.nf.test
@@ -72,9 +72,19 @@ nextflow_process {
                 { assert process.success },
                 { assert snapshot(
                     process.out.all_enrich,
-                    process.out.plot_png,
                     process.out.sub_enrich,
-                    process.out.sub_plot,
+                    [
+                        file(process.out.plot_png[0][1]).name,
+                        file(process.out.sub_plot[0][1][0]).name,
+                        file(process.out.sub_plot[0][1][1]).name,
+                        file(process.out.sub_plot[0][1][2]).name,
+                        file(process.out.sub_plot[0][1][3]).name,
+                        file(process.out.sub_plot[0][1][4]).name,
+                        file(process.out.sub_plot[0][1][5]).name,
+                        file(process.out.sub_plot[0][1][6]).name,
+                        file(process.out.sub_plot[0][1][7]).name,
+                        file(process.out.sub_plot[0][1][8]).name,
+                    ],  // assert unstable file
                     process.out.filtered_gmt,
                     process.out.session_info.collect{ meta,session_info -> file(session_info).name }, //assert unstable file
                     process.out.versions,

diff --git a/modules/nf-core/gprofiler2/gost/tests/main.nf.test.snap b/modules/nf-core/gprofiler2/gost/tests/main.nf.test.snap
@@ -13,18 +13,6 @@
                     "Condition_genotype_WT_KO.gprofiler2.all_enriched_pathways.tsv:md5,1134a02ca061c463bcbff277eefbfb19"
                 ]
             ],
-            [
-                [
-                    {
-                        "id": "Condition_genotype_WT_KO",
-                        "variable": "Condition genotype",
-                        "reference": "WT",
-                        "target": "KO",
-                        "blocking": "batch"
-                    },
-                    "Condition_genotype_WT_KO.gprofiler2.gostplot.png:md5,4b83d1bcf7dc9dbf6cef3d545e440c5b"
-                ]
-            ],
             [
                 [
                     {
@@ -48,26 +36,16 @@
                 ]
             ],
             [
-                [
-                    {
-                        "id": "Condition_genotype_WT_KO",
-                        "variable": "Condition genotype",
-                        "reference": "WT",
-                        "target": "KO",
-                        "blocking": "batch"
-                    },
-                    [
-                        "Condition_genotype_WT_KO.gprofiler2.GO:BP.sub_enriched_pathways.png:md5,d89498267e985adf0ad1266e2deb9f48",
-                        "Condition_genotype_WT_KO.gprofiler2.GO:CC.sub_enriched_pathways.png:md5,e04cdd51b200671613254d021d3af242",
-                        "Condition_genotype_WT_KO.gprofiler2.GO:MF.sub_enriched_pathways.png:md5,33ea0652d78111978677acde0fe7f807",
-                        "Condition_genotype_WT_KO.gprofiler2.HP.sub_enriched_pathways.png:md5,6c040ac4baba73ae5637b00650e6aea1",
-                        "Condition_genotype_WT_KO.gprofiler2.KEGG.sub_enriched_pathways.png:md5,fbd232c4eeced95ceda60b43a02dbe1f",
-                        "Condition_genotype_WT_KO.gprofiler2.MIRNA.sub_enriched_pathways.png:md5,956880d3bf4852a06b0ffaaaba565732",
-                        "Condition_genotype_WT_KO.gprofiler2.REAC.sub_enriched_pathways.png:md5,0e8f9217d275668986771dc7fede3170",
-                        "Condition_genotype_WT_KO.gprofiler2.TF.sub_enriched_pathways.png:md5,0697164bc87e95e6508db966df94e01e",
-                        "Condition_genotype_WT_KO.gprofiler2.WP.sub_enriched_pathways.png:md5,09976762c7541ff9e5009e8763986845"
-                    ]
-                ]
+                "Condition_genotype_WT_KO.gprofiler2.gostplot.png",
+                "Condition_genotype_WT_KO.gprofiler2.GO:BP.sub_enriched_pathways.png",
+                "Condition_genotype_WT_KO.gprofiler2.GO:CC.sub_enriched_pathways.png",
+                "Condition_genotype_WT_KO.gprofiler2.GO:MF.sub_enriched_pathways.png",
+                "Condition_genotype_WT_KO.gprofiler2.HP.sub_enriched_pathways.png",
+                "Condition_genotype_WT_KO.gprofiler2.KEGG.sub_enriched_pathways.png",
+                "Condition_genotype_WT_KO.gprofiler2.MIRNA.sub_enriched_pathways.png",
+                "Condition_genotype_WT_KO.gprofiler2.REAC.sub_enriched_pathways.png",
+                "Condition_genotype_WT_KO.gprofiler2.TF.sub_enriched_pathways.png",
+                "Condition_genotype_WT_KO.gprofiler2.WP.sub_enriched_pathways.png"
             ],
             [
 
@@ -89,7 +67,7 @@
             "nf-test": "0.9.2",
             "nextflow": "24.10.3"
         },
-        "timestamp": "2025-01-09T13:43:18.555455129"
+        "timestamp": "2025-01-21T11:20:46.746311783"
     },
     "stub": {
         "content": [
@@ -298,6 +276,6 @@
             "nf-test": "0.9.2",
             "nextflow": "24.10.3"
         },
-        "timestamp": "2025-01-09T13:43:36.462475057"
+        "timestamp": "2025-01-21T11:22:25.04488011"
     }
 }