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This should be quick, basically, the function gse_to_srx() can't recognize GEO ids.
gsm_ids = [x.split('=')[1].strip() for x in fetch_url(url) if x.startswith('GSM')] should be
gsm_ids = [x.split('=')[1].strip() for x in fetch_url(url) if x.split('=')[1].strip().startswith('GSM')]
Thanks for creating fetchngs pipeline!
--Kai
The text was updated successfully, but these errors were encountered:
Hi,
This should be quick, basically, the function gse_to_srx() can't recognize GEO ids.
gsm_ids = [x.split('=')[1].strip() for x in fetch_url(url) if x.startswith('GSM')] should be
gsm_ids = [x.split('=')[1].strip() for x in fetch_url(url) if x.split('=')[1].strip().startswith('GSM')]
Thanks for creating fetchngs pipeline!
--Kai
The text was updated successfully, but these errors were encountered: