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Refactor how versions are handled in pipeline #811

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Refactor how versions are handled in pipeline

Refactor how versions are handled in pipeline #811

Triggered via pull request January 18, 2024 09:44
@drpatelhdrpatelh
synchronize #252
drpatelh:fixes
Status Success
Total duration 12m 18s
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ci.yml

on: pull_request
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Choose nextflow versions to test against depending on target branch
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Matrix: test
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12 errors and 12 warnings
subworkflows/utils_nfvalidation_plugin docker NF latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
sra_nf_core_pipeline_taxprofiler docker NF latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
sra_nf_core_pipeline_atacseq docker NF latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
sra_custom_ena_metadata_fields docker NF latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
sra_skip_fastq_download docker NF latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/utils_nfcore_pipeline docker NF latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
sra_default_parameters docker NF latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/utils_nextflow_pipeline docker NF latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
sra_nf_core_pipeline_rnaseq docker NF latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
sra_force_sratools_download docker NF latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
sra_nf_core_pipeline_viralrecon docker NF latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
pipeline_fetchngs docker NF latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/utils_nfvalidation_plugin docker NF latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
sra_nf_core_pipeline_taxprofiler docker NF latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
sra_nf_core_pipeline_atacseq docker NF latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
sra_custom_ena_metadata_fields docker NF latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
sra_skip_fastq_download docker NF latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/utils_nfcore_pipeline docker NF latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
sra_default_parameters docker NF latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/utils_nextflow_pipeline docker NF latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
sra_nf_core_pipeline_rnaseq docker NF latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
sra_force_sratools_download docker NF latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
sra_nf_core_pipeline_viralrecon docker NF latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
pipeline_fetchngs docker NF latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23