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Update samtools #331

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Update samtools

Update samtools #331

Triggered via pull request February 13, 2024 19:21
@asp8200asp8200
opened #74
asp8200:update_samtools
Status Failure
Total duration 42s
Artifacts –

ci.yml

on: pull_request
Matrix: Run pipeline with test data
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16 errors and 14 warnings
Run pipeline with test data (23.04.0, test_collate_fast)
Process completed with exit code 1.
Run pipeline with test data (latest-everything, test_cram)
The job was canceled because "_23_04_0_test_collate_fas" failed.
Run pipeline with test data (latest-everything, test_no_bai)
The job was canceled because "_23_04_0_test_collate_fas" failed.
Run pipeline with test data (23.04.0, test_no_stats)
Process completed with exit code 1.
Run pipeline with test data (latest-everything, test_collate_fast)
The operation was canceled.
Run pipeline with test data (latest-everything, test_chr)
The operation was canceled.
Run pipeline with test data (latest-everything, test_no_qc)
The operation was canceled.
Run pipeline with test data (23.04.0, test_no_crai)
The operation was canceled.
Run pipeline with test data (latest-everything, test_no_crai)
The operation was canceled.
Run pipeline with test data (23.04.0, test_no_bai)
The operation was canceled.
Run pipeline with test data (latest-everything, test)
The operation was canceled.
Run pipeline with test data (latest-everything, test_no_stats)
The operation was canceled.
Run pipeline with test data (23.04.0, test_no_qc)
The operation was canceled.
Run pipeline with test data (23.04.0, test_cram)
The operation was canceled.
Run pipeline with test data (23.04.0, test_chr)
The operation was canceled.
Run pipeline with test data (23.04.0, test)
The operation was canceled.
Run pipeline with test data (23.04.0, test_collate_fast)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (23.04.0, test_no_stats)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (latest-everything, test_collate_fast)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (latest-everything, test_chr)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (latest-everything, test_no_qc)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (23.04.0, test_no_crai)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (latest-everything, test_no_crai)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (23.04.0, test_no_bai)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (latest-everything, test)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (latest-everything, test_no_stats)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (23.04.0, test_no_qc)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (23.04.0, test_cram)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (23.04.0, test_chr)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (23.04.0, test)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.