Conda Package

[mpatrou]

Short description of the changes:

The code adds the ability to create a conda package and deploy on anaconda registry through github runner.

Long description of the changes:

• Conda package configuration
• github runner for anaconda
• updates in github runners to use micromamba with channels and cached environment. (there was a warning with the previous way with the conda-incubator for the cached section)
• workflow/main function restructure
• test added for main function

to test run pytest
to test everything on analysis cluster run pytest --all

Check list for the pull request

• I have read the [CONTRIBUTING]
• I have read the [CODE_OF_CONDUCT]
• I have added tests for my changes
• I have updated the documentation accordingly

Check list for the reviewer

• I have read the [CONTRIBUTING]
• I have verified the proposed changes
• best software practices
  • all internal functions have an underbar, as is python standard
  • clearly named variables (better to be verbose in variable names)
  • code comments explaining the intent of code blocks
• All the tests are passing
• The documentation is up to date
• code comments added when explaining intent

Manual test for the reviewer

References

[codecov-commenter]

Codecov Report

Attention: Patch coverage is 84.21053% with 3 lines in your changes missing coverage. Please review.

Project coverage is 54.64%. Comparing base (24f1954) to head (3de53d6).

Files	Patch %	Lines
src/garnet/reduction/version.py	0.00%	2 Missing ⚠️
src/garnet/workflow.py	94.11%	1 Missing ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##             next       #5      +/-   ##
==========================================
+ Coverage   54.45%   54.64%   +0.19%     
==========================================
  Files          15       15              
  Lines        2301     2313      +12     
==========================================
+ Hits         1253     1264      +11     
- Misses       1048     1049       +1     

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[searscr]

Looks Good, builds as expected and all tests pass. Just check to make sure we still need oncat and clean-up if no longer needed.

[searscr]

Is this still required? I don't see it used anywhere in the repo?

[searscr]

pyoncat is not being installed in the environment and is not used. Can this be removed?

[searscr]

Don't think we still need this channel.

[searscr]

Same here.

[searscr]

Follows same practice as other repositories in the project and builds conda package as expected.