COVID-19 analysis

Confirmed infections over time

Model estimates of confirmed infections over time

Summary by country

Notes

• Data is from https://github.com/CSSEGISandData/COVID-19

• Model predictions are based on the best-fit sigmoidal model for each country:

  where are fit from the existing data.

Initial project setup

1. If necessary, install conda or miniconda
2. Clone the repo
3. From a terminal shell, run conda env create --file environment.yml, then conda activate cms-ai

Updating dependencies

1. To update your local environment dependencies to match the environment.yml file, run conda env update --file environment.yml --prune

Installing new dependencies

1. Add new package(s) to the environment.yml file and then run conda env update --file environment.yml --prune.
2. To list outdated packages, run conda update --all, which will show a list of packages that will be updated. Reply N to just see the list. Manually update any dependencies by editing the environment.yml file and then running conda env update --file environment.yml --prune.