Code

Feature/website#84

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Merged

shaziaruybal merged 78 commits intodevelopmrc-ide/PGEforge:developfrom feature/websitemrc-ide/PGEforge:feature/websiteCopy head branch name to clipboardAug 5, 2024

+1,312-330

Commits

Commits on Jul 9, 2024

• Merge pull request #82 from mrc-ide/main

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• making README more informative

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Commits on Jul 10, 2024

• updates to r-universe page and uploading relevant images

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• adding cute small logos to footer

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• first updates to tutorials overview doc, need to check links

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Commits on Jul 14, 2024

• updates to RADISH page

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• adding text to landing page

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Commits on Jul 17, 2024

• editing navigation links

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• first pass data description file - still needs work!

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• fix typo

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Commits on Jul 18, 2024

• edits to text in data main page

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• upload imgs needed for data page

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Commits on Jul 26, 2024

• first pass how to contribute page

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• first pass software stds page

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• add first pass community rules

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• add link to community rules in contributors page

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• add some background text to page and edit landscaping table to render nicely

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Commits on Jul 29, 2024

• first pass software stds text and clean up table

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• edits to software stds text

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• additions to home page

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• additions to home page

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• upload software stds csv

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• adding dataset qmds

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• upload PGEforge header image

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• add home page header CSS styling

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Commits on Aug 1, 2024

• add CI GitHub action to check that website renders when changes are pushed to develop, main or feature/website (and for PRs to dev and main) - can come back and check whether we really want all PRs…

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• fixing quarto dependency error

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• fix typo

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• fix another typo ... i'm clearly tired 🫠

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• update pkgs (but come back to this and streamline with a dependencies or pkgs script)

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• update upload-artifact action version

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• yet another typo fml

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• fixing hyperlinks

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• removing library(tidyverse) and only including {dplyr} as dep for faster rendering and CI checks

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• missed one! switch tidyverse to dplyr

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• fixing more hyperlinks

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• commenting out {googlesheets4}

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• adding ggplot2

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• commenting out plots for now

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• making the footer look pretty 🤩

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Commits on Aug 2, 2024

• edits to tutorial overview

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• updates to software stds page

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• fix hyperlink

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• upload pgeforge ecosystem png

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• updates to how to contribute pg

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• remove pop gen tool resources or those that only have summary docs and no tutorials

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• add future work pg

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• clean version of software stds

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• remove CI checks for now :(

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• ok that didn't remove it, so just adding back the branches

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• update workflows

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• add nice PR template

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• updating workflows coming soon

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• adding stringr pkg

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• clean version of tool software stds eval (tools_to_standards.csv)

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• calculate user and dev scores and nicer table formatting

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• hosting tutorials for all tools with complete resources

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• placeholder future work

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• clean version of tool landscaping matrix

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• update text and format tool landscaping table nicely

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• updates to how to contribute page

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Commits on Aug 5, 2024

• rearranging software stds to after landscaping

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• updating footer

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• updated to landscaping matrix and table title formatting

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• updates to software stds pg

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• updates to how to contribute tools to landscaping and evaluation

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• adding analysis workflows to how to contribute pg, but will check

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• updates to future work pg

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• remove traffic light gif

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• making contributors page look nicer and adding fadel and aimee

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• minor edit

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• fix hyperlink

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• add use cases placehodler

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• removing _freeze/ from .gitignore so we don't always re-render unless necessary, also so we preserve and version ctrl _freeze/

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• .

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• catch up _freeze/

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• updating github action workflow to use the quarto-dev/quarto-actions/render@v2 that will hopefully work now

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• adding github actions for automatically publishing the website on push or PR into main (assuming changes to dev can be tested with the check-quarto-render workflow)

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