translocation

monarch-initiative · May 12, 2024 · ff83434 · ff83434
1 parent 56514b6
commit ff83434
Show file tree

Hide file tree

Showing 2 changed files with 1 addition and 7 deletions.
diff --git a/src/pyphetools/__init__.py b/src/pyphetools/__init__.py
@@ -4,7 +4,7 @@
 from . import visualization
 from . import validation
 
-__version__ = "0.9.85"
+__version__ = "0.9.86"
 
 __all__ = [
     "creation",

diff --git a/src/pyphetools/creation/structural_variant.py b/src/pyphetools/creation/structural_variant.py
@@ -161,7 +161,6 @@ def chromosomal_duplication(cell_contents,
     def chromosomal_inversion(cell_contents,
                               gene_symbol,
                               gene_id,
-                              genotype,
                               variant_id=None):
         """
         create a StructuralVariant object for a chromosomal inversion
@@ -172,8 +171,6 @@ def chromosomal_inversion(cell_contents,
         :type gene_symbol: str
         :param gene_id: the identifier (using HGNC) of the gene, e.g., GLI3 is HGNC:4319
         :type gene_id: str
-        :param genotype: Genotype (heterozygous, homozygous, hemizygous) of this variant call
-        :type genotype: str
         :param variant_id: an identifier for the variant
         :type variant_id: str, optional
         """
@@ -188,7 +185,6 @@ def chromosomal_inversion(cell_contents,
     def chromosomal_translocation(cell_contents,
                               gene_symbol,
                               gene_id,
-                              genotype,
                               variant_id=None):
         """
         create a StructuralVariant object for a chromosomal translocation
@@ -199,8 +195,6 @@ def chromosomal_translocation(cell_contents,
         :type gene_symbol: str
         :param gene_id: the identifier (using HGNC) of the gene, e.g., GLI3 is HGNC:4319
         :type gene_id: str
-        :param genotype: Genotype (heterozygous, homozygous, hemizygous) of this variant call
-        :type genotype: str
         :param variant_id: an identifier for the variant
         :type variant_id: str, optional
         """