Updated docker version

mobinasri · Nov 30, 2024 · 0e3cd1e · 0e3cd1e
1 parent c99e0e9
commit 0e3cd1e
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Showing 6 changed files with 266 additions and 266 deletions.
diff --git a/Makefile b/Makefile
@@ -1,7 +1,7 @@
 # Definitions
 repository = mobinasri
 identifier = secphase
-version = v0.4.3
+version = v0.4.4
 git_commit ?= $(shell git log --pretty=oneline -n 1 | cut -f1 -d " ")
 name = ${repository}/${identifier}
 tag = ${version}--${git_commit}

diff --git a/README.md b/README.md
diff --git a/wdls/workflows/correct_bam.wdl b/wdls/workflows/correct_bam.wdl
@@ -22,7 +22,7 @@ task correctBam {
         Int memSize=8
         Int threadCount=8
         Int diskSize=512
-        String dockerImage="mobinasri/secphase:v0.4.3"
+        String dockerImage="mobinasri/secphase:v0.4.4"
         Int preemptible=2
     }
     command <<<

diff --git a/wdls/workflows/get_secphased_read_ids.wdl b/wdls/workflows/get_secphased_read_ids.wdl
@@ -16,7 +16,7 @@ task getPhasedReadIds{
         Int memSize=16
         Int threadCount=4
         Int diskSize=256
-        String dockerImage="mobinasri/secphase:v0.4.3"
+        String dockerImage="mobinasri/secphase:v0.4.4"
         Int preemptible=2
     }
     command <<<

diff --git a/wdls/workflows/secphase.wdl b/wdls/workflows/secphase.wdl
@@ -7,8 +7,8 @@ workflow runSecPhase {
         File? phasedVcf
         File? variantBed
         String secphaseOptions = "--hifi"
-        String secphaseDockerImage = "mobinasri/secphase:v0.4.3"
-        String version = "v0.4.3"
+        String secphaseDockerImage = "mobinasri/secphase:v0.4.4"
+        String version = "v0.4.4"
     }
     call sortByName {
         input:
@@ -53,7 +53,7 @@ task secphase {
         Int memSize=32
         Int threadCount=8
         Int diskSize=128
-        String dockerImage="mobinasri/secphase:v0.4.3"
+        String dockerImage="mobinasri/secphase:v0.4.4"
         Int preemptible=2
         String zones="us-west2-a"
     }
@@ -115,7 +115,7 @@ task sortByName {
         Int memSize=16
         Int threadCount=8
         Int diskSize=1024
-        String dockerImage="mobinasri/secphase:v0.4.3"
+        String dockerImage="mobinasri/secphase:v0.4.4"
         Int preemptible=2
         String zones="us-west2-a"
     }

diff --git a/wdls/workflows/secphase_end_to_end.wdl b/wdls/workflows/secphase_end_to_end.wdl
@@ -25,12 +25,12 @@ task secphaseEndToEnd {
         File? variantBed
         String secphaseOptions = "--hifi"
         String? correctBamOptions
-        String version = "v0.4.3"
+        String version = "v0.4.4"
         # runtime configurations
         Int memSize=16
         Int threadCount=8
         Int diskSize=1024
-        String dockerImage="mobinasri/secphase:v0.4.3"
+        String dockerImage="mobinasri/secphase:v0.4.4"
         Int preemptible=2
         String zones="us-west2-a"
     }