MAPpoly version 0.3.3

Fix minor bugs

MAPpoly version 0.3.2

• Added function find_blocks
• Added several utility functions
• Update function filter_individuals
• Update filtering graphics
• Update some color schemes

MAPpoly version 0.3.1

In this release,

Since version 0.3.0 we:

• Minor modifications to the test functions
• Changed 'smacof' package to suggested

MAPpoly version 0.3.0

In this release,

Other changes since version 0.3.0 we:

• Added function est_pairwise_rf2 to avoid memory overflow in personal computers when estimating recombination fraction in large number of markers.
• Added Vignette
• Added function 'export_qtlpoly'
• Added function 'filter_individuals'
• Changed the name of function 'calc_homoprob' to 'calc_homologprob'

MAPpoly version 0.2.3

In this release the suggested packages are used conditionally, following §1.1.3.1 of 'Writing R Extensions'. We also added the flag LazyDataCompression: xz in DESCRIPTION file, following §1.1.6 of 'Writing R Extensions'.

Other changes since version 0.2.1

• Fix minor bugs
• Update documentation
• Update DESCRIPTION file
• Added function plot_GIC

v-0.2.1

MAPpoly version 0.2.1

This release fixes the error found when checking with "no-long-double" Linux check.

Also it implements the following:

• Added estimation of two-point recombination fraction using genotype probabilities
• Added 'read_fitpoly' function
• New graphical feature in function 'rf_snp_filt'
• Added option to plot large recombination fraction matrix using cell aggregation for a given order
• Added estimation of map distance using the MDSMap package procedure (projects the MDS order onto a single dimension using principal curves)

v-0.2.0

First CRAN resease