Merge sagemath#21003

build/pkgs/onetbb/SPKG.rst

@@ -0,0 +1,19 @@
+onetbb: oneAPI Threading Building Blocks
+========================================
+
+Description
+-----------
+
+C++ parallelization library
+
+
+License
+-------
+
+Apache License, Version 2.0
+
+
+Upstream Contact
+----------------
+
+https://github.com/oneapi-src/oneTBB

build/pkgs/onetbb/checksums.ini

@@ -0,0 +1,5 @@
+tarball=onetbb-VERSION.tar.gz
+sha1=e4be99dc35948052296105d2ae7da6d34e01ba2d
+md5=68e617448f71df02d8688c84d53778f6
+cksum=1573392748
+upstream_url=https://github.com/oneapi-src/oneTBB/archive/refs/tags/vVERSION.tar.gz

build/pkgs/onetbb/dependencies

@@ -0,0 +1 @@
+| cmake

build/pkgs/onetbb/distros/alpine.txt

@@ -0,0 +1 @@
+libtbb-dev

build/pkgs/onetbb/distros/arch.txt

@@ -0,0 +1 @@
+intel-oneapi-tbb

build/pkgs/onetbb/distros/debian.txt

@@ -0,0 +1 @@
+libtbb-dev

build/pkgs/onetbb/distros/fedora.txt

@@ -0,0 +1 @@
+tbb-devel

build/pkgs/onetbb/distros/freebsd.txt

@@ -0,0 +1 @@
+devel/onetbb

build/pkgs/onetbb/distros/gentoo.txt

@@ -0,0 +1 @@
+dev-cpp/tbb

build/pkgs/onetbb/distros/homebrew.txt

@@ -0,0 +1 @@
+tbb

build/pkgs/onetbb/distros/macports.txt

@@ -0,0 +1 @@
+onetbb

build/pkgs/onetbb/distros/nix.txt

@@ -0,0 +1 @@
+tbb

build/pkgs/onetbb/distros/void.txt

@@ -0,0 +1 @@
+tbb-devel

build/pkgs/onetbb/package-version.txt

@@ -0,0 +1 @@
+2021.7.0

build/pkgs/onetbb/spkg-configure.m4

@@ -0,0 +1,17 @@
+SAGE_SPKG_CONFIGURE([onetbb], [dnl
+    AC_MSG_CHECKING([whether oneTBB >= 2018 is available])
+    rm -rf conftest_srcdir
+    mkdir conftest_srcdir
+    cat > conftest_srcdir/CMakeLists.txt <<EOF
+cmake_minimum_required (VERSION 3.11.0)
+project(dummy)
+# from https://github.com/scipopt/papilo/blob/master/CMakeLists.txt
+find_package(TBB 2018 COMPONENTS tbb tbbmalloc REQUIRED)
+EOF
+    AS_IF([cmake -S conftest_srcdir -B conftest_srcdir/build >& ]AS_MESSAGE_LOG_FD[ 2>&1], [dnl
+        AC_MSG_RESULT([yes])
+    ], [dnl
+        AC_MSG_RESULT([no])
+        AS_VAR_SET([sage_spkg_install_onetbb], [yes])
+    ])
+])

build/pkgs/onetbb/spkg-install.in

@@ -0,0 +1,6 @@
+cd src
+mkdir build
+cd build
+sdh_cmake -DTBB_STRICT=off ..
+sdh_make
+sdh_make_install

build/pkgs/onetbb/type

@@ -0,0 +1 @@
+optional

build/pkgs/papilo/SPKG.rst

@@ -0,0 +1,22 @@
+papilo: Parallel presolve for integer and linear optimization
+=============================================================
+
+Description
+-----------
+
+parallel presolve routines for (mixed integer) linear programming
+problems. The routines are implemented using templates which allows
+switching to higher precision or rational arithmetic using the boost
+multiprecision package.
+
+
+License
+-------
+
+LGPL 3.0
+
+
+Upstream Contact
+----------------
+
+https://github.com/scipopt/papilo/

build/pkgs/papilo/checksums.ini

@@ -0,0 +1,5 @@
+tarball=papilo-VERSION.tar.gz
+sha1=85d599ac9936aa1ddf687e04273b995522909de5
+md5=c41f5aa615ffc9914f8ca924947aa8cb
+cksum=1535425476
+upstream_url=https://github.com/scipopt/papilo/archive/refs/tags/vVERSION.tar.gz

build/pkgs/papilo/dependencies

@@ -0,0 +1 @@
+$(MP_LIBRARY) boost_cropped onetbb $(BLAS) gfortran | cmake

build/pkgs/papilo/package-version.txt

@@ -0,0 +1 @@
+2.1.1

build/pkgs/papilo/patches/0001-CMakeLists.txt-Do-not-require-boost-program_options-.patch

@@ -0,0 +1,26 @@
+From 1fc5aecb4eca500917407b008c8c8eb8637a9c27 Mon Sep 17 00:00:00 2001
+From: Matthias Koeppe <mkoeppe@math.ucdavis.edu>
+Date: Sat, 19 Nov 2022 19:03:37 -0800
+Subject: [PATCH] CMakeLists.txt: Do not require boost program_options for the
+ library
+
+---
+ CMakeLists.txt | 2 +-
+ 1 file changed, 1 insertion(+), 1 deletion(-)
+
+diff --git a/CMakeLists.txt b/CMakeLists.txt
+index 7256877..db905aa 100644
+--- a/CMakeLists.txt
++++ b/CMakeLists.txt
+@@ -47,7 +47,7 @@ if(NOT CMAKE_BUILD_TYPE)
+     set(CMAKE_BUILD_TYPE Release)
+ endif()
+
+-find_package(Boost ${BOOST_MIN_VERSION} COMPONENTS program_options REQUIRED)
++find_package(Boost ${BOOST_MIN_VERSION} REQUIRED)
+
+ if(GMP)
+     find_package(GMP)
+-- 
+2.37.3
+

build/pkgs/papilo/spkg-install.in

@@ -0,0 +1,8 @@
+cd src
+mkdir build
+cd build
+sdh_cmake -DPAPILO_NO_BINARIES=1 \
+          -DBOOST_ROOT="$SAGE_LOCAL" \
+          ..
+sdh_make
+sdh_make_install

build/pkgs/papilo/type

@@ -0,0 +1 @@
+optional

build/pkgs/pyscipopt/SPKG.rst

@@ -0,0 +1,22 @@
+pyscipopt: Python interface and modeling environment for SCIP
+=============================================================
+
+Description
+-----------
+
+Python interface and modeling environment for SCIP
+
+License
+-------
+
+MIT
+
+Upstream Contact
+----------------
+
+https://pypi.org/project/PySCIPOpt/
+
+Dependencies
+------------
+
+scipoptsuite

build/pkgs/pyscipopt/checksums.ini

@@ -0,0 +1,5 @@
+tarball=PySCIPOpt-VERSION.tar.gz
+sha1=0c3644ce6a0624774dceaef10694e090e3863ab5
+md5=2e4ce8087fb9acac8e806655f20c3d70
+cksum=3316817556
+upstream_url=https://pypi.io/packages/source/p/pyscipopt/PySCIPOpt-VERSION.tar.gz

build/pkgs/scipoptsuite/dependencies → build/pkgs/pyscipopt/dependencies

@@ -1,4 +1,4 @@
-$(MP_LIBRARY) bliss readline | cmake
+$(PYTHON) scip | $(PYTHON_TOOLCHAIN)
 
 ----------
 All lines of this file are ignored except the first.

build/pkgs/pyscipopt/distros/conda.txt

@@ -0,0 +1 @@
+pyscipopt

build/pkgs/pyscipopt/distros/freebsd.txt

@@ -0,0 +1 @@
+math/py-PySCIPOpt

build/pkgs/pyscipopt/install-requires.txt

@@ -0,0 +1 @@
+PySCIPOpt

build/pkgs/pyscipopt/package-version.txt

@@ -0,0 +1 @@
+4.2.0

build/pkgs/pyscipopt/spkg-install.in

@@ -0,0 +1,3 @@
+cd src
+export SCIPOPTDIR="$SAGE_LOCAL"
+sdh_pip_install .

build/pkgs/pyscipopt/type

@@ -0,0 +1 @@
+optional

build/pkgs/scip/SPKG.rst

@@ -0,0 +1,29 @@
+scip: Mixed integer programming solver
+======================================
+
+Description
+-----------
+
+SCIP is currently one of the fastest open source mixed integer
+programming (MIP) solvers. It is also a framework for constraint integer
+programming and branch-cut-and-price. It allows total control of the
+solution process and the access of detailed information down to the guts
+of the solver.
+
+License
+-------
+
+Apache 2.0
+
+
+Upstream Contact
+----------------
+
+https://scipopt.org/#scipoptsuite
+
+
+Dependencies
+------------
+
+scip brings its own patched version of the bliss library.
+This will conflict with the optional package bliss.

build/pkgs/scip/checksums.ini

@@ -0,0 +1,5 @@
+tarball=scip-VERSION.tar.gz
+sha1=2637767428e285b6ddda8c462f1cc31d66833d80
+md5=b657369986ecd9b2944206d11ecce2e4
+cksum=967379932
+upstream_url=https://github.com/scipopt/scip/archive/refs/tags/vVERSION.tar.gz

build/pkgs/scip/dependencies

@@ -0,0 +1,4 @@
+$(MP_LIBRARY) readline soplex papilo zlib | cmake
+
+----------
+All lines of this file are ignored except the first.

build/pkgs/scip/distros/conda.txt

@@ -0,0 +1 @@
+scip

build/pkgs/scip/package-version.txt

@@ -0,0 +1 @@
+802

build/pkgs/scip/patches/no_rpath.patch

@@ -0,0 +1,40 @@
+commit eaff18abb55c86e90d44583731550c874dc3c3e0
+Author: Matthias Koeppe <mkoeppe@math.ucdavis.edu>
+Date:   Sun Nov 27 14:12:32 2022 -0800
+
+    CMakeLists.txt: Remove hardcoded RPATH settings
+
+diff --git a/src/CMakeLists.txt b/src/CMakeLists.txt
+index 8629ace18b..db2505d74b 100644
+--- a/src/CMakeLists.txt
++++ b/src/CMakeLists.txt
+@@ -3,8 +3,7 @@
+ #
+ function(setLibProperties targetname outputname)
+     set_target_properties(${targetname} PROPERTIES
+-        OUTPUT_NAME ${outputname}
+-        MACOSX_RPATH "${CMAKE_INSTALL_PREFIX}/lib")
++        OUTPUT_NAME ${outputname})
+ endfunction(setLibProperties)
+
+ set(CMAKE_C_STANDARD 99)
+@@ -1092,7 +1091,6 @@ add_dependencies(scip scip_update_githash)
+ set_target_properties(libscip PROPERTIES
+     VERSION ${SCIP_VERSION_MAJOR}.${SCIP_VERSION_MINOR}.${SCIP_VERSION_PATCH}.${SCIP_VERSION_SUB}
+     SOVERSION ${SCIP_VERSION_MAJOR}.${SCIP_VERSION_MINOR}
+-    INSTALL_RPATH_USE_LINK_PATH TRUE
+     CXX_VISIBILITY_PRESET hidden
+     C_VISIBILITY_PRESET hidden
+     VISIBILITY_INLINES_HIDDEN 1)
+@@ -1102,11 +1100,6 @@ target_include_directories(scip PUBLIC
+     $<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}>
+     $<INSTALL_INTERFACE:include>)
+
+-# set the install rpath to the installed destination
+-set_target_properties(scip PROPERTIES
+-    INSTALL_RPATH "${CMAKE_INSTALL_PREFIX}/lib"
+-    INSTALL_RPATH_USE_LINK_PATH TRUE)
+-
+ # install the header files of scip
+ install(FILES ${lpiheaders} DESTINATION include/lpi)
+ install(FILES ${dijkstraheaders} DESTINATION include/dijkstra)

build/pkgs/scip/spkg-install.in

@@ -0,0 +1,17 @@
+cd src
+mkdir build
+cd build
+sdh_cmake -DCMAKE_INSTALL_LIBDIR=lib \
+         -DCMAKE_VERBOSE_MAKEFILE=ON \
+         -DCMAKE_BUILD_WITH_INSTALL_NAME_DIR=ON \
+         -DGMP_DIR="${SAGE_GMP_PREFIX}" \
+         -DReadline_ROOT_DIR=$(pkg-config --variable=prefix readline) \
+         -DHistory_ROOT_DIR=$(pkg-config --variable=prefix readline) \
+         -DIPOPT=off \
+         -DPAPILO=on -DPAPILO_DIR="${SAGE_LOCAL}" \
+         -DZIMPL=off \
+         -DAMPL=off \
+         -DSYM=bliss \
+         ..
+sdh_make
+sdh_make_install

build/pkgs/scip/type

@@ -0,0 +1 @@
+optional