Adding wigos id as attribute

metocean · May 2, 2024 · c295368 · c295368
1 parent 41dc9c8
commit c295368
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Showing 9 changed files with 16 additions and 6 deletions.
diff --git a/Dockerfile_MOS b/Dockerfile_MOS
@@ -1,13 +1,13 @@
-FROM metocean/ops-qc:v0.4.7
+FROM metocean/ops-qc:v0.5.1
 
 ADD . $SOURCE/moana-qc
 
 ARG GIT_TOKEN
 
-RUN pip install -r $SOURCE/moana-qc/requirements/default.txt &&\
-    pip install -I -r $SOURCE/moana-qc/requirements/opslibs.txt &&\
-    pip install -r $SOURCE/moana-qc/requirements/tests.txt &&\
-    pip install $SOURCE/moana-qc &&\
+#RUN pip install -r $SOURCE/moana-qc/requirements/default.txt &&\
+#    pip install -I -r $SOURCE/moana-qc/requirements/opslibs.txt &&\
+# RUN pip install -r $SOURCE/moana-qc/requirements/tests.txt &&\
+RUN pip install $SOURCE/moana-qc &&\
     sudo pip uninstall -y cloudpickle &&\
     sudo pip uninstall -y ops-mds &&\
     sudo pip uninstall -y snowflake-sqlalchemy &&\

diff --git a/ops_qc/__init__.py b/ops_qc/__init__.py
@@ -1 +1 @@
-__version__ = '0.5.0'
+__version__ = '0.6.0'
diff --git a/ops_qc/__pycache__/qc_apply.cpython-36.pyc b/ops_qc/__pycache__/qc_apply.cpython-36.pyc
diff --git a/ops_qc/__pycache__/qc_apply.cpython-37.pyc b/ops_qc/__pycache__/qc_apply.cpython-37.pyc
diff --git a/ops_qc/__pycache__/qc_preprocess.cpython-36.pyc b/ops_qc/__pycache__/qc_preprocess.cpython-36.pyc
diff --git a/ops_qc/__pycache__/qc_readers.cpython-36.pyc b/ops_qc/__pycache__/qc_readers.cpython-36.pyc
diff --git a/ops_qc/__pycache__/qc_utils.cpython-36.pyc b/ops_qc/__pycache__/qc_utils.cpython-36.pyc
diff --git a/ops_qc/__pycache__/qc_utils.cpython-37.pyc b/ops_qc/__pycache__/qc_utils.cpython-37.pyc
diff --git a/ops_qc/preprocess.py b/ops_qc/preprocess.py
@@ -53,6 +53,7 @@ def __init__(
             "deployment_method": "Fishing method",
             "programme_name": "Programme",
             "public": "Public",
+            "wigos_ID": "WIGOS ID",
             "publication_date": "Publication Date",
         },
         add_sitename=True,
@@ -118,6 +119,15 @@ def _classify_gear(self):
                         self.ds.attrs["public"] = str(row["Public"])
                     except:
                         pass
+                    try:
+                        self.ds.attrs["wigos_id"] = str(row["WIGOS ID"])
+                    except:
+                        self.ds.attrs["wigos_id"] = "NA"
+                    try: 
+                        self.ds.attrs["internal_id"] = str(row[0])
+                    except:
+                        pass
+
                     time_check += 1
                     self.status_dict.update(self.ds.attrs)
             if time_check < 1: