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@malabz

MALABZ_UESTC

multiple sequence alignment research

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  1. HAlign-2 HAlign-2 Public

    a multiple sequence alignment tool

    HTML 4 4

  2. HAlign-3 HAlign-3 Public

    do multiple nucleotide sequence alignment fast and accurately

    Java 16 4

  3. stmsa-cpp stmsa-cpp Public

    do multiple nucleotide sequence alignment fast and accurately

    C++ 3 1

  4. WMSA WMSA Public

    The Multiple Sequence Alignment which developed by Wym6912

    C 3 1

  5. MSATOOLS MSATOOLS Public

    C++ 5 3

Repositories

Showing 10 of 45 repositories
  • MSAvc Public
    malabz/MSAvc’s past year of commit activity
    C++ 1 MIT 0 0 0 Updated Apr 4, 2025
  • MSATOOLS Public
    malabz/MSATOOLS’s past year of commit activity
    C++ 5 3 0 0 Updated Apr 1, 2025
  • FORAlign Public Forked from wym6912/FORAlign

    FORAlign: Accelerating gap-affine DNA pairwise sequence alignment using FOR-blocks based on FOur Russians approach with linear space complexity

    malabz/FORAlign’s past year of commit activity
    C 1 2 0 0 Updated Apr 1, 2025
  • Chimera Public Forked from LoadStar822/Chimera

    Chimera: A Versatile Metagenomic Classification Tool

    malabz/Chimera’s past year of commit activity
    C 7 MIT 2 0 0 Updated Mar 26, 2025
  • deMEM Public Forked from wym6912/deMEM

    deMEM: a novel divide-and-conquer framework based on de Bruijn graph for scalable multiple sequence alignment

    malabz/deMEM’s past year of commit activity
    C++ 0 1 0 0 Updated Mar 11, 2025
  • SplitMEM_BWT Public Forked from wym6912/SplitMEM_BWT

    SplitMEM submodule for deMEM

    malabz/SplitMEM_BWT’s past year of commit activity
    C++ 0 GPL-3.0 1 0 0 Updated Mar 11, 2025
  • sdsl-lite-all-in-one Public Forked from wym6912/sdsl-lite-all-in-one

    Parallel suffix array calculation, used in SplitMEM

    malabz/sdsl-lite-all-in-one’s past year of commit activity
    C++ 0 1 0 0 Updated Mar 11, 2025
  • subhalign3 Public Forked from wym6912/subhalign3

    HAlign 3 for deMEM

    malabz/subhalign3’s past year of commit activity
    Batchfile 0 1 0 0 Updated Mar 10, 2025
  • submafft Public Forked from wym6912/submafft

    MAFFT Submodule for deMEM

    malabz/submafft’s past year of commit activity
    Shell 0 1 0 0 Updated Mar 10, 2025
  • CaPS-SA Public Forked from jamshed/CaPS-SA

    Cache-friendly, Parallel, and Samplesort-based Constructor for Suffix Arrays and LCP Arrays

    malabz/CaPS-SA’s past year of commit activity
    C++ 0 MIT 6 0 0 Updated Mar 4, 2025
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