v1.11.3 -- fix citations in vignettes

leekgroup · Aug 24, 2017 · 2115025 · 2115025
1 parent c768def
commit 2115025
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diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,8 +1,8 @@
 Package: derfinderHelper
 Type: Package
 Title: derfinder helper package
-Version: 1.11.2
-Date: 2017-08-21
+Version: 1.11.3
+Date: 2017-08-24
 Authors@R: c(person("Leonardo", "Collado-Torres", role = c("aut", "cre"), email
     = "lcollado@jhu.edu"), person(c("Andrew", "E."), "Jaffe", role = "aut",
     email = "andrew.jaffe@libd.org"), person(c("Jeffrey", "T."), "Leek",

diff --git a/vignettes/derfinderHelper.Rmd b/vignettes/derfinderHelper.Rmd
@@ -71,7 +71,7 @@ cite_options(hyperlink = 'to.doc', citation_format = 'text', style = 'html')
 # https://github.com/cboettig/knitcitations/issues/63
 
 ## Write bibliography information
-bibs <- c(knitcitations = citation('knitcitations'),
+bib <- c(knitcitations = citation('knitcitations'),
     derfinderHelper = citation('derfinderHelper')[1], 
     BiocStyle = citation('BiocStyle'),
     knitr = citation('knitr')[3],
@@ -83,12 +83,7 @@ bibs <- c(knitcitations = citation('knitcitations'),
     S4Vectors = citation('S4Vectors'),
     devtools = citation('devtools'),
     testthat = citation('testthat'))
-write.bibtex(bibs,
-    file = 'derfinderHelperRef.bib')
-bib <- read.bibtex('derfinderHelperRef.bib')
-
-## Assign short names
-names(bib) <- names(bibs)
+write.bibtex(bib, file = 'derfinderHelperRef.bib')
 ```