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@lcrawlab

Crawford Lab

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  1. BANNs Public

    Code and simulations using biologically annotated neural networks

    HTML 21 3

  2. i-LDSC Public

    Code and simulations using interaction-LD score regression

    Python 13 1

  3. mvMAPIT Public

    The multivariate MArginal ePIstasis Test

    R 11 1

  4. recall Public

    Calibrated clustering with artificial variables to avoid over-clustering in single-cell RNA-sequencing

    R 3

  5. SINATRA Public

    A statistical framework for feature selection and association mapping with 3D shapes

    R 8 4

  6. SINATRA-Pro Public

    Topological data analytic approach for discovering biophysical signatures in protein dynamics

    Python 4

Repositories

Showing 10 of 19 repositories
  • R 0 0 0 0 Updated Feb 13, 2025
  • callback Public archive

    Calibrated clustering via knockoffs for single-cell genomics

    R 10 0 0 0 Updated Feb 13, 2025
  • sme Public

    A fast and scalable method to detect epistasis in complex traits from biobank-scale studies

    C++ 1 0 0 0 Updated Jan 17, 2025
  • cancer-drug-synergy-prediction Public

    Github repo for cancer drug synergy prediction work

    Jupyter Notebook 0 MIT 0 0 0 Updated Dec 28, 2024
  • Geneformer Public
    Python 0 0 0 0 Updated Dec 14, 2024
  • recall Public

    Calibrated clustering with artificial variables to avoid over-clustering in single-cell RNA-sequencing

    R 3 0 0 0 Updated Nov 19, 2024
  • mvMAPIT Public

    The multivariate MArginal ePIstasis Test

    R 11 GPL-3.0 1 0 0 Updated Oct 21, 2024
  • i-LDSC Public

    Code and simulations using interaction-LD score regression

    Python 13 GPL-3.0 1 1 0 Updated Jul 2, 2024
  • multio-viz Public

    A platform for the interactive assessment of gene regulatory networks

    R 3 GPL-3.0 0 0 0 Updated May 10, 2024
  • SINATRA-Pro Public

    Topological data analytic approach for discovering biophysical signatures in protein dynamics

    Python 4 MIT 0 0 0 Updated Mar 14, 2024

People

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