Update API documentation

Signed-off-by: Nicolas Bock <nicolasbock@gmail.com>

docs/API/C_usage.html

@@ -33,7 +33,7 @@
  <tr style="height: 56px;">
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">bml
-   &#160;<span id="projectnumber">1.3.1</span>
+   &#160;<span id="projectnumber">2.3.0</span>
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    <div id="projectbrief">Basic Matrix Library (bml):  A matrix library for linear algebra operations,  supporting several data structures.</div>
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 <div class="ttc" id="abml__types_8h_html_a8d762ed64876f48d5eb687cb62f20d5cab1dee362b4b8fac13bfc3e3df1d88af0"><div class="ttname"><a href="bml__types_8h.html#a8d762ed64876f48d5eb687cb62f20d5cab1dee362b4b8fac13bfc3e3df1d88af0">single_real</a></div><div class="ttdeci">@ single_real</div><div class="ttdef"><b>Definition:</b> bml_types.h:29</div></div>
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+<div class="ttc" id="agroup__allocate__group__C_html_ga1db50ac5b32a15d261d36da2c6415898"><div class="ttname"><a href="group__allocate__group__C.html#ga1db50ac5b32a15d261d36da2c6415898">bml_zero_matrix</a></div><div class="ttdeci">bml_matrix_t * bml_zero_matrix(bml_matrix_type_t matrix_type, bml_matrix_precision_t matrix_precision, int N, int M, bml_distribution_mode_t distrib_mode)</div><div class="ttdef"><b>Definition:</b> bml_allocate.c:391</div></div>
 <div class="ttc" id="abml_8h_html"><div class="ttname"><a href="bml_8h.html">bml.h</a></div></div>
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 <div class="ttc" id="abml__types_8h_html_afe10f3a7e985a8627616dfda2dec6fc9"><div class="ttname"><a href="bml__types_8h.html#afe10f3a7e985a8627616dfda2dec6fc9">bml_matrix_t</a></div><div class="ttdeci">void bml_matrix_t</div><div class="ttdef"><b>Definition:</b> bml_types.h:51</div></div>
-<div class="ttc" id="agroup__allocate__group__C_html_gae442bd3e06e8f8ff92aad499f0d8ebf2"><div class="ttname"><a href="group__allocate__group__C.html#gae442bd3e06e8f8ff92aad499f0d8ebf2">bml_deallocate</a></div><div class="ttdeci">void bml_deallocate(bml_matrix_t **A)</div><div class="ttdef"><b>Definition:</b> bml_allocate.c:159</div></div>
+<div class="ttc" id="agroup__allocate__group__C_html_gae442bd3e06e8f8ff92aad499f0d8ebf2"><div class="ttname"><a href="group__allocate__group__C.html#gae442bd3e06e8f8ff92aad499f0d8ebf2">bml_deallocate</a></div><div class="ttdeci">void bml_deallocate(bml_matrix_t **A)</div><div class="ttdef"><b>Definition:</b> bml_allocate.c:161</div></div>
 <!-- start footer part -->
 <div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
   <ul>
-    <li class="footer">Generated on Wed Sep 9 2020 19:37:59 for bml by
+    <li class="footer">Generated on Fri Aug 11 2023 18:45:31 for bml by
     <a href="http://www.doxygen.org/index.html">
     <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.17 </li>
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docs/API/annotated.html

@@ -33,7 +33,7 @@
  <tr style="height: 56px;">
   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">bml
-   &#160;<span id="projectnumber">1.3.1</span>
+   &#160;<span id="projectnumber">2.3.0</span>
    </div>
    <div id="projectbrief">Basic Matrix Library (bml):  A matrix library for linear algebra operations,  supporting several data structures.</div>
   </td>
@@ -105,7 +105,7 @@
 <!-- start footer part -->
 <div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
   <ul>
-    <li class="footer">Generated on Wed Sep 9 2020 19:37:59 for bml by
+    <li class="footer">Generated on Fri Aug 11 2023 18:45:31 for bml by
     <a href="http://www.doxygen.org/index.html">
     <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.8.17 </li>
   </ul>

docs/API/blas_8h_source.html

@@ -5,7 +5,7 @@
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-<title>bml: /tmp/bml/src/C-interface/blas.h Source File</title>
+<title>bml: /bml/src/C-interface/blas.h Source File</title>
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@@ -33,7 +33,7 @@
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   <td id="projectalign" style="padding-left: 0.5em;">
    <div id="projectname">bml
-   &#160;<span id="projectnumber">1.3.1</span>
+   &#160;<span id="projectnumber">2.3.0</span>
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    <div id="projectbrief">Basic Matrix Library (bml):  A matrix library for linear algebra operations,  supporting several data structures.</div>
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@@ -113,13 +113,13 @@
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docs/API/bml_8h.html

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-    <li class="footer">Generated on Wed Sep 9 2020 19:37:59 for bml by
+    <li class="footer">Generated on Fri Aug 11 2023 18:45:31 for bml by
     <a href="http://www.doxygen.org/index.html">
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@@ -33,7 +33,7 @@
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+<div class="ttc" id="agroup__add__group__C_html_gaeb7ff9c3ec65086a8b07939703389488"><div class="ttname"><a href="group__add__group__C.html#gaeb7ff9c3ec65086a8b07939703389488">bml_add_norm</a></div><div class="ttdeci">double bml_add_norm(bml_matrix_t *A, bml_matrix_t *B, double alpha, double beta, double threshold)</div><div class="ttdef"><b>Definition:</b> bml_add.c:73</div></div>
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docs/API/bml__adjungate__triangle_8h.html

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docs/API/bml__adjungate__triangle_8h_source.html

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@@ -33,7 +33,7 @@
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+<div class="ttc" id="abml__introspection_8h_html_a0866fa0746f283b3a1fbb9c7315a79d1"><div class="ttname"><a href="bml__introspection_8h.html#a0866fa0746f283b3a1fbb9c7315a79d1">bml_get_type</a></div><div class="ttdeci">bml_matrix_type_t bml_get_type(bml_matrix_t *A)</div><div class="ttdef"><b>Definition:</b> bml_introspection.c:22</div></div>
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+<div class="ttc" id="abml__copy_8h_html_a85658741451e0f82d61a89fef927994d"><div class="ttname"><a href="bml__copy_8h.html#a85658741451e0f82d61a89fef927994d">bml_reorder</a></div><div class="ttdeci">void bml_reorder(bml_matrix_t *A, int *perm)</div><div class="ttdef"><b>Definition:</b> bml_copy.c:121</div></div>
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+<div class="ttc" id="abml__parallel_8h_html_a56f2a8d8e4902f16e3f84afacd4aa159"><div class="ttname"><a href="bml__parallel_8h.html#a56f2a8d8e4902f16e3f84afacd4aa159">bml_getNRanks</a></div><div class="ttdeci">int bml_getNRanks(void)</div><div class="ttdef"><b>Definition:</b> bml_parallel.c:41</div></div>
+<div class="ttc" id="abml__logger_8h_html_abd0b0523397fb05f0ed46fc217fb630f"><div class="ttname"><a href="bml__logger_8h.html#abd0b0523397fb05f0ed46fc217fb630f">LOG_DEBUG</a></div><div class="ttdeci">#define LOG_DEBUG(format,...)</div><div class="ttdef"><b>Definition:</b> bml_logger.h:43</div></div>
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+<div class="ttc" id="abml__copy_8h_html_a78fffca268eac0872a36b118de63833c"><div class="ttname"><a href="bml__copy_8h.html#a78fffca268eac0872a36b118de63833c">bml_copy_domain</a></div><div class="ttdeci">void bml_copy_domain(bml_domain_t *A, bml_domain_t *B)</div><div class="ttdef"><b>Definition:</b> bml_copy.c:151</div></div>
+<div class="ttc" id="abml__copy_8h_html_ace101d071a90b8b49ddeafcb2d38fdc5"><div class="ttname"><a href="bml__copy_8h.html#ace101d071a90b8b49ddeafcb2d38fdc5">bml_restore_domain</a></div><div class="ttdeci">void bml_restore_domain(bml_matrix_t *A)</div><div class="ttdef"><b>Definition:</b> bml_copy.c:195</div></div>
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+<div class="ttc" id="abml__introspection_8h_html_a020000b9660d63c9d904b253499abee7"><div class="ttname"><a href="bml__introspection_8h.html#a020000b9660d63c9d904b253499abee7">bml_get_N</a></div><div class="ttdeci">int bml_get_N(bml_matrix_t *A)</div><div class="ttdef"><b>Definition:</b> bml_introspection.c:106</div></div>
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+<div class="ttc" id="abml__introspection_8h_html_ab67839d414b9b3044e6c424fc686c94d"><div class="ttname"><a href="bml__introspection_8h.html#ab67839d414b9b3044e6c424fc686c94d">bml_get_M</a></div><div class="ttdeci">int bml_get_M(bml_matrix_t *A)</div><div class="ttdef"><b>Definition:</b> bml_introspection.c:144</div></div>
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+<div class="ttc" id="abml__copy_8h_html_a9ae0e957c2e1c8a38fd4b9076b3dd1ac"><div class="ttname"><a href="bml__copy_8h.html#a9ae0e957c2e1c8a38fd4b9076b3dd1ac">bml_copy_new</a></div><div class="ttdeci">bml_matrix_t * bml_copy_new(bml_matrix_t *A)</div><div class="ttdef"><b>Definition:</b> bml_copy.c:26</div></div>
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+<div class="ttc" id="abml__types_8h_html_ab7d3c21318898af00e7c28712f369842aa4ec306759a6a7076aee2d7bf1289309"><div class="ttname"><a href="bml__types_8h.html#ab7d3c21318898af00e7c28712f369842aa4ec306759a6a7076aee2d7bf1289309">distributed2d</a></div><div class="ttdeci">@ distributed2d</div><div class="ttdef"><b>Definition:</b> bml_types.h:20</div></div>
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+<div class="ttc" id="abml__copy_8h_html_ac085c5247157c8a2133de2c7b9222b7c"><div class="ttname"><a href="bml__copy_8h.html#ac085c5247157c8a2133de2c7b9222b7c">bml_copy</a></div><div class="ttdeci">void bml_copy(bml_matrix_t *A, bml_matrix_t *B)</div><div class="ttdef"><b>Definition:</b> bml_copy.c:64</div></div>
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 <div class="ttc" id="astructbml__domain__t_html"><div class="ttname"><a href="structbml__domain__t.html">bml_domain_t</a></div><div class="ttdef"><b>Definition:</b> bml_types.h:80</div></div>
 <div class="ttc" id="abml__types_8h_html_afe10f3a7e985a8627616dfda2dec6fc9"><div class="ttname"><a href="bml__types_8h.html#afe10f3a7e985a8627616dfda2dec6fc9">bml_matrix_t</a></div><div class="ttdeci">void bml_matrix_t</div><div class="ttdef"><b>Definition:</b> bml_types.h:51</div></div>
 <div class="ttc" id="abml__types_8h_html"><div class="ttname"><a href="bml__types_8h.html">bml_types.h</a></div></div>
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-<div class="ttc" id="abml__copy_8h_html_a0c2853d4c5be208711f26a280e8a8a82"><div class="ttname"><a href="bml__copy_8h.html#a0c2853d4c5be208711f26a280e8a8a82">bml_save_domain</a></div><div class="ttdeci">void bml_save_domain(bml_matrix_t *A)</div><div class="ttdef"><b>Definition:</b> bml_copy.c:165</div></div>
+<div class="ttc" id="abml__types_8h_html_ab7d3c21318898af00e7c28712f369842a3f553532794be93f9d14a4ace94a1954"><div class="ttname"><a href="bml__types_8h.html#ab7d3c21318898af00e7c28712f369842a3f553532794be93f9d14a4ace94a1954">csr</a></div><div class="ttdeci">@ csr</div><div class="ttdef"><b>Definition:</b> bml_types.h:18</div></div>
+<div class="ttc" id="abml__copy_8h_html_a0c2853d4c5be208711f26a280e8a8a82"><div class="ttname"><a href="bml__copy_8h.html#a0c2853d4c5be208711f26a280e8a8a82">bml_save_domain</a></div><div class="ttdeci">void bml_save_domain(bml_matrix_t *A)</div><div class="ttdef"><b>Definition:</b> bml_copy.c:170</div></div>
 <!-- start footer part -->
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docs/API/bml__diagonalize_8h_source.html

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+<title>bml: /bml/src/C-interface/bml_diagonalize.h Source File</title>
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@@ -33,7 +33,7 @@
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+<div class="ttc" id="abml__introspection_8h_html_a0866fa0746f283b3a1fbb9c7315a79d1"><div class="ttname"><a href="bml__introspection_8h.html#a0866fa0746f283b3a1fbb9c7315a79d1">bml_get_type</a></div><div class="ttdeci">bml_matrix_type_t bml_get_type(bml_matrix_t *A)</div><div class="ttdef"><b>Definition:</b> bml_introspection.c:22</div></div>
+<div class="ttc" id="abml__logger_8h_html_abffaf9cecb61026cac6db71a16ace9c5"><div class="ttname"><a href="bml__logger_8h.html#abffaf9cecb61026cac6db71a16ace9c5">LOG_ERROR</a></div><div class="ttdeci">#define LOG_ERROR(format,...)</div><div class="ttdef"><b>Definition:</b> bml_logger.h:52</div></div>
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+<div class="ttc" id="abml__types_8h_html_ab7d3c21318898af00e7c28712f369842aa4ec306759a6a7076aee2d7bf1289309"><div class="ttname"><a href="bml__types_8h.html#ab7d3c21318898af00e7c28712f369842aa4ec306759a6a7076aee2d7bf1289309">distributed2d</a></div><div class="ttdeci">@ distributed2d</div><div class="ttdef"><b>Definition:</b> bml_types.h:20</div></div>
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docs/API/dir_000004_000003.html → docs/API/bml__element__multiply_8h.html

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-<title>bml: /tmp/bml/src/Fortran-interface -&gt; C-interface Relation</title>
+<title>bml: /bml/src/C-interface/bml_element_multiply.h File Reference</title>
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-   &#160;<span id="projectnumber">1.3.1</span>
+   &#160;<span id="projectnumber">2.3.0</span>
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@@ -89,14 +89,81 @@
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 </div>
 
+<div class="header">
+  <div class="summary">
+<a href="#func-members">Functions</a>  </div>
+  <div class="headertitle">
+<div class="title">bml_element_multiply.h File Reference</div>  </div>
+</div><!--header-->
 <div class="contents">
-<h3>Fortran-interface &rarr; C-interface Relation</h3><table class="dirtab"><tr class="dirtab"><th class="dirtab">File in src/Fortran-interface</th><th class="dirtab">Includes file in src/C-interface</th></tr><tr class="dirtab"><td class="dirtab"><b>bml_print_matrix_wrapper.c</b></td><td class="dirtab"><a class="el" href="bml__utilities_8h.html">bml_utilities.h</a></td></tr></table></div><!-- contents -->
+<div class="textblock"><code>#include &quot;<a class="el" href="bml__types_8h_source.html">bml_types.h</a>&quot;</code><br />
+</div>
+<p><a href="bml__element__multiply_8h_source.html">Go to the source code of this file.</a></p>
+<table class="memberdecls">
+<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="func-members"></a>
+Functions</h2></td></tr>
+<tr class="memitem:a60633b0dd40a045e151b08493068a58a"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="bml__element__multiply_8h.html#a60633b0dd40a045e151b08493068a58a">bml_element_multiply_AB</a> (<a class="el" href="bml__types_8h.html#afe10f3a7e985a8627616dfda2dec6fc9">bml_matrix_t</a> *A, <a class="el" href="bml__types_8h.html#afe10f3a7e985a8627616dfda2dec6fc9">bml_matrix_t</a> *B, <a class="el" href="bml__types_8h.html#afe10f3a7e985a8627616dfda2dec6fc9">bml_matrix_t</a> *C, double threshold)</td></tr>
+<tr class="separator:a60633b0dd40a045e151b08493068a58a"><td class="memSeparator" colspan="2">&#160;</td></tr>
+</table>
+<h2 class="groupheader">Function Documentation</h2>
+<a id="a60633b0dd40a045e151b08493068a58a"></a>
+<h2 class="memtitle"><span class="permalink"><a href="#a60633b0dd40a045e151b08493068a58a">&#9670;&nbsp;</a></span>bml_element_multiply_AB()</h2>
+
+<div class="memitem">
+<div class="memproto">
+      <table class="memname">
+        <tr>
+          <td class="memname">void bml_element_multiply_AB </td>
+          <td>(</td>
+          <td class="paramtype"><a class="el" href="bml__types_8h.html#afe10f3a7e985a8627616dfda2dec6fc9">bml_matrix_t</a> *&#160;</td>
+          <td class="paramname"><em>A</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype"><a class="el" href="bml__types_8h.html#afe10f3a7e985a8627616dfda2dec6fc9">bml_matrix_t</a> *&#160;</td>
+          <td class="paramname"><em>B</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype"><a class="el" href="bml__types_8h.html#afe10f3a7e985a8627616dfda2dec6fc9">bml_matrix_t</a> *&#160;</td>
+          <td class="paramname"><em>C</em>, </td>
+        </tr>
+        <tr>
+          <td class="paramkey"></td>
+          <td></td>
+          <td class="paramtype">double&#160;</td>
+          <td class="paramname"><em>threshold</em>&#160;</td>
+        </tr>
+        <tr>
+          <td></td>
+          <td>)</td>
+          <td></td><td></td>
+        </tr>
+      </table>
+</div><div class="memdoc">
+<p>Element-wise Matrix multiply (Hadamard product)</p>
+<p>\( C_{ij} \leftarrow A_{ij} * B_{ij} \)</p>
+<dl class="params"><dt>Parameters</dt><dd>
+  <table class="params">
+    <tr><td class="paramname">A</td><td>Matrix A </td></tr>
+    <tr><td class="paramname">B</td><td>Matrix B </td></tr>
+    <tr><td class="paramname">C</td><td>Matrix C </td></tr>
+    <tr><td class="paramname">threshold</td><td>Threshold for multiplication </td></tr>
+  </table>
+  </dd>
+</dl>
+
+</div>
+</div>
+</div><!-- contents -->
 </div><!-- doc-content -->
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docs/API/bml__element__multiply_8h.js

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+var bml__element__multiply_8h =
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+];