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Commits on May 20, 2024

• Fix erroneous name of pod5 output dir for ONT runs

  kedhammar

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Commits on May 8, 2024

• Merge pull request NationalGenomicsInfrastructure#424 from kedhammar/broaden-ont-qc-categorization

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  aanil

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Commits on May 7, 2024

• ruff fix

  kedhammar

  committed
  b40dc62

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• init

  kedhammar

  committed
  0f7ab54

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Commits on Apr 24, 2024

• Merge pull request NationalGenomicsInfrastructure#423 from kedhammar/improve-vlog-check

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  kedhammar

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Commits on Apr 22, 2024

• refine versionlog check and bump versionlog

  kedhammar

  committed
  3a7ed18

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Commits on Apr 10, 2024

• Merge pull request NationalGenomicsInfrastructure#421 from kedhammar/test-coverage

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  kedhammar

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• bump vlog

  kedhammar

  committed
  9049316

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• type annotation, remove demux dir (created by tests)

  kedhammar

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  c125613

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• add ngi_data dir, clarify test scope

  kedhammar

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  3b317ba

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• update docs and init logging for testing

  kedhammar

  committed
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• add taca log file

  kedhammar

  committed
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Commits on Apr 9, 2024

• wip, perform demux and increase test cov by 5%

  kedhammar

  committed
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• typos

  kedhammar

  committed
  1995320

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Commits on Mar 26, 2024

• Merge pull request NationalGenomicsInfrastructure#420 from chuan-wang/master

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  chuan-wang

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Commits on Mar 21, 2024

• Include project IDs in the run folder tarball

  chuan-wang

  committed
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Commits on Mar 15, 2024

• ruff linting

  chuan-wang

  committed
  1a7996e

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• Fix cases that MiSeq samplesheet misses index or index2

  chuan-wang

  committed
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• Merge pull request NationalGenomicsInfrastructure#34 from SciLifeLab/master

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  chuan-wang

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Commits on Mar 13, 2024

• Merge pull request NationalGenomicsInfrastructure#419 from kedhammar/fix-anglerfish

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  kedhammar

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Commits on Mar 5, 2024

• assert header fits to table

  kedhammar

  committed
  91f86ce

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• typo

  kedhammar

  committed
  2b9c8f9

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• compress testing parameter table by separating headers

  kedhammar

  committed
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Commits on Mar 4, 2024

• one more TODO left

  kedhammar

  committed
  9de0dad

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• parametrize testing

  kedhammar

  committed
  93a24df

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• explicate return statement argument

  kedhammar

  committed
  e17505b

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• improve test setup and add method test

  kedhammar

  committed
  fbe4bfa

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• bump vlog

  kedhammar

  committed
  2d3c8e9

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• ruff 0.3.0

  kedhammar

  committed
  2d4e7a7

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• Merge remote-tracking branch 'upstream/master' into fix-anglerfish

  kedhammar

  committed
  412d8b8

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• Merge pull request NationalGenomicsInfrastructure#418 from kedhammar/tests

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  kedhammar

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Commits on Mar 1, 2024

• Skip run processing after starting Anglerfish

  kedhammar

  committed
  619a38f

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• bugfix

  kedhammar

  committed
  886e507

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• fix test

  kedhammar

  committed
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• restructure logic to reduce complexity, accommodate non-error skips and improve documentation of decision making

  kedhammar

  committed
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