Merge pull request NationalGenomicsInfrastructure#425 from kedhammar/…

…master Fix erroneous name of pod5 output dir for ONT runs
kedhammar · May 20, 2024 · 7f75636 · 7f75636
2 parents 395d830 + 64fc26c
commit 7f75636
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diff --git a/VERSIONLOG.md b/VERSIONLOG.md
@@ -1,5 +1,9 @@
 # TACA Version Log
 
+## 20240520.1
+
+Fix erroneous name of pod5 output dir for ONT runs.
+
 ## 20240507.1
 
 Broaden ONT transfer script's categorization of QC runs to either experiment dir or sample dir starting with "QC\_".

diff --git a/taca/nanopore/ONT_run_classes.py b/taca/nanopore/ONT_run_classes.py
@@ -501,7 +501,7 @@ def has_fastq_output(self) -> bool:
     def has_raw_seq_output(self) -> bool:
         """Check whether run has sequencing data output."""
 
-        raw_seq_dirs = ["pod5_pass", "fast5_pass"]
+        raw_seq_dirs = ["pod5", "fast5_pass"]
 
         for dir in raw_seq_dirs:
             if os.path.exists(os.path.join(self.run_abspath, dir)):