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add seq metadata file to homology section
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Tianhao-Gu committed Apr 10, 2024
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3 changes: 2 additions & 1 deletion docs/genome_to_collection.md
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Expand Up @@ -159,7 +159,8 @@ arangoimport --file $PARSED_FILE \
```

### Create homology matchers in ArangoDB
For generated sketch file (`<kbase_collection>_<source_ver>_merged_sketch.msh`), follow the instructions outlined in the
For generated sketch file (`<kbase_collection>_<source_ver>_merged_sketch.msh`) and sequence metadata file
(`<kbase_collection>_<source_ver>_seq_metadata.jsonl`), follow the instructions outlined in the
[Homology Service](https://github.com/jgi-kbase/AssemblyHomologyService) to upload them to the homology server.
Ensure to utilize the namespace when creating the collection with a homology matcher.

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