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Copy pathCladeSiteHeatmap.txt
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CladeSiteHeatmap.txt
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Mut B.1 B.1.1 B.1.2 B.1.177 B.1.429 B.1.351 B.1.1.7 B.1.526 P.1 AY.26 AY.5 AY.4 AY.122 AY.98 AY.44 AY.47 AY.25 AY.3 AY.43 AY.39 AY.103 AY.100 BA.1 BA.1.17 BA.1.18 BA.1.20 BA.1.15 BA.1.1.18 BA.1.17.2 BA.1.1 BA.1.15.1 BA.1.1.1 BA.2.10 BA.2.3 BA.2.9 BA.2 BA.2.12.1 BA.4 BA.4.1 BA.5 BA.5.1 BA.5.5 BE.1 BA.5.6 BA.5.2.1 BA.5.2 BA.4.6
340D 0.001618123 0 0 0 0 0 0.000865426 0 0 0 0 0.001857749 0.004424779 0 0.003229279 0 0 0.00143472 0.001811594 0.004 0.000831255 0.003012048 0.011385199 0 0 0 0.012765957 0.03125 0.023255814 0.017218543 0.02739726 0 0 0 0.018181818 0.012040134 0.00621118 0 0 0 0 0 0 0 0.00210084 0.001953125 0
340K 0 0 0 0 0 0 0.000432713 0 0 0 0.00456621 0.002123142 0.002212389 0 0.001076426 0 0.002739726 0.00143472 0 0.004 0.003325021 0.003012048 0.015180266 0 0 0.021276596 0.017021277 0 0.009966777 0.01192053 0.01369863 0.042553191 0 0.023076923 0.022727273 0.023411371 0 0 0 0 0.006637168 0 0.007518797 0 0.006302521 0.001953125 0
346I 0 0.003690037 0.003636364 0.003424658 0 0 0.002596279 0.01754386 0 0.005714286 0.00913242 0.003184713 0.002212389 0.004081633 0.004305705 0.006060606 0.005479452 0.00286944 0.001811594 0.012 0.002493766 0 0.0056926 0 0 0 0 0 0.016611296 0 0 0 0 0 0 0.005351171 0.008281573 0.043956044 0.036231884 0.032786885 0.024336283 0.014492754 0.037593985 0.027272727 0.016806723 0.033203125 0.02173913
346K 0.006472492 0.007380074 0.007272727 0.003424658 0 0 0.007356123 0 0 0 0 0.002388535 0 0.008163265 0 0 0.005479452 0 0.001811594 0.004 0.00166251 0 0.055028463 0.083333333 0.042553191 0.106382979 0.072340426 NA 0.026578073 NA 0.04109589 NA 0.044444444 0.007692308 0.031818182 0.015384615 0.004140787 0 0.007246377 0.016393443 0.008849558 0.014492754 0.022556391 0.009090909 0 0.0078125 0
346S 0 0 0 0 0 0 0.001730852 0 0 0.005714286 0 0.001857749 0 0 0 0 0.004109589 0.00143472 0 0.004 0.00166251 0.009036145 0.001897533 0.020833333 0 0 0 0 0.006644518 0 0.01369863 0 0.022222222 0 0 0.004013378 0.004140787 0.043956044 0.014492754 0.016393443 0.013274336 0.050724638 0.030075188 0.027272727 0.010504202 0.02734375 0
346T 0.003236246 0 0 0.003424658 0.007874016 0 0.000432713 0 0 0 0 0 0 0 0.001076426 0 0.001369863 0 0 0 0 0 0.028462998 0.020833333 0.063829787 0 0.008510638 0 0.013289037 0 0.054794521 0.021276596 0.022222222 0.015384615 0.031818182 0.033444816 0.047619048 0.021978022 0.036231884 0.081967213 0.086283186 0.028985507 0.090225564 0.045454545 0.029411765 0.0859375 NA
384L 0.03236246 0.033210332 0.025454545 0.037671233 0.031496063 0.04 0.028126352 0.043859649 0.028571429 0.017142857 0.00456621 0.013269639 0.004424779 0.020408163 0.006458558 0.012121212 0.017808219 0.007173601 0.012681159 0.004 0.010806318 0.021084337 0.001897533 0 0.021276596 0 0.021276596 0.010416667 0.003322259 0.003311258 0.01369863 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
384S 0.01618123 0.011070111 0.010909091 0.020547945 0.007874016 0.04 0.014279533 0.026315789 0 0.005714286 0.00913242 0.009023355 0.002212389 0 0.00861141 0 0.004109589 0.007173601 0.010869565 0.012 0.006650042 0.006024096 0.017077799 0.020833333 0 0 0.017021277 0.010416667 0.019933555 0.014569536 0.01369863 0 0 0.007692308 0.004545455 0.008695652 0.008281573 0.010989011 0.014492754 0 0.011061947 0.007246377 0.007518797 0 0.004201681 0.017578125 0.02173913
427N 0 0 0 0.003424658 0 0 0.000865426 0 0.028571429 0 0.00456621 0 0.002212389 0.004081633 0.001076426 0 0 0.00143472 0 0 0 0.003012048 0 0 0 0 0.004255319 0 0.006644518 0 0 0 0 0 0.004545455 0.001337793 0 0 0 0 0.002212389 0.007246377 0.007518797 0 0 0 0
427Y 0.003236246 0.011070111 0 0.01369863 0.007874016 0.04 0.006490697 0 0.028571429 0 0.00456621 0.00477707 0.006637168 0.012244898 0.004305705 0.006060606 0.005479452 0.004304161 0.003623188 0.008 0.007481297 0 0 0 0 0 0 0 0 0.001324503 0 0 0 0 0 0.000668896 0.004140787 0 0 0 0.002212389 0.007246377 0.007518797 0 0.00210084 0 0
444M 0 0 0 0 0 0 0.000865426 0 0 0.005714286 0 0.000530786 0 0 0.003229279 0 0 0.00143472 0 0 0 0.003012048 0 0 0 0 0 0 0 0.001324503 0 0 0 0 0 0 0.002070393 0.021978022 0.014492754 0 0.006637168 0 0.037593985 0.009090909 0.021008403 0.015625 0.007246377
444N 0.006472492 0.007380074 0 0 0 0 0.009952402 0 0.014285714 0 0.01369863 0.009023355 0.002212389 0.008163265 0.009687836 0 0.008219178 0.007173601 0.010869565 0.008 0.009975062 0.012048193 0.003795066 0 0 0 0 0.020833333 0 0.006622517 0 0 0 0.015384615 0.013636364 0.014715719 0.086956522 0.131868132 0.094202899 0.06557377 0.075221239 0.086956522 0.07518797 0.081818182 0.092436975 0.080078125 0.043478261
444R 0.008090615 0.007380074 0 0.003424658 0 0 0.003894418 0 0.014285714 0.017142857 0.00456621 0.002919321 0 0 0.002152853 0 0.008219178 0.005738881 0.005434783 0.004 0.008312552 0.003012048 0.003795066 0.020833333 0 0 0.004255319 0.010416667 0.003322259 0.004635762 0.02739726 0 0.022222222 0.030769231 0.036363636 0.022073579 0.031055901 0.043956044 0.079710145 0.049180328 0.061946903 0.043478261 0.060150376 0.090909091 0.058823529 0.048828125 0.02173913
445A 0 0 0 0 0 0 0.001298139 0 0 0 0 0.002388535 0 0 0.002152853 0 0 0 0 0.004 0.002493766 0.003012048 0.007590133 0 0.021276596 0 0.004255319 0 0.006644518 0.009271523 0.01369863 0 0 0.015384615 0.013636364 0.005351171 0.01242236 0.043956044 0.036231884 0.016393443 0.044247788 0.050724638 0.015037594 0.018181818 0.029411765 0.04296875 0.043478261
445F 0.001618123 0.003690037 0.003636364 0 0 0 0.001298139 0 0 0.005714286 0.00913242 0.001857749 0.004424779 0 0 0 0 0 0.005434783 0 0.003325021 0.003012048 0 0 0 0 0 0 0.003322259 0.00397351 0 0 0 0 0.004545455 0.005351171 0.008281573 0.010989011 0.014492754 0.049180328 0.028761062 0.007246377 0.037593985 0.036363636 0.035714286 0.029296875 0.014492754
446D 0.001618123 0 0 0 0 0 0.000865426 0 0 0.005714286 0 0.001061571 0 0 0.001076426 0 0.004109589 0.00143472 0 0 0.00166251 0.003012048 0 0 0 0 0 0 0 0 0 0 0 0 0.018181818 0.010702341 0.00621118 0.021978022 0.014492754 0 0.013274336 0.036231884 0.007518797 0.027272727 0.012605042 0.029296875 0
446S 0.008090615 0.003690037 0.010909091 0.003424658 0.007874016 0 0.008221549 0.00877193 0 0.005714286 0.00456621 0.00477707 0.006637168 0.008163265 0.00861141 0.006060606 0.008219178 0.010043042 0.003623188 0.004 0.00166251 0.015060241 NA NA NA NA NA NA NA NA NA NA 0 0.007692308 0.027272727 0.02006689 0.051759834 0.054945055 0.050724638 0.06557377 0.042035398 0.036231884 0.022556391 0.045454545 0.010504202 0.03515625 0.028985507
446V 0.037216828 0.036900369 0.032727273 0.034246575 0.062992126 0 0.028991778 0.061403509 0.042857143 0.142857143 0.077625571 0.077760085 0.103982301 0.089795918 0.094725511 0.072727273 0.075342466 0.088952654 0.115942029 0.068 0.088944306 0.105421687 0 0 0 0 0 0 0 0 0 0 0.022222222 0 0 0.001337793 0.00621118 0.010989011 0.014492754 0 0.024336283 0.007246377 0.007518797 0.009090909 0.025210084 0.015625 0.014492754
452M 0.001618123 0.003690037 0.007272727 0 0 0 0.003894418 0.00877193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.003795066 0 0.042553191 0.021276596 0.004255319 0 0.006644518 0.010596026 0.02739726 0 0.022222222 0.030769231 0.027272727 0.036120401 0 0 0 0 0 0 0 0 0 0 0
452Q 0.003236246 0 0 0 0 0 0 0 0 0 0.00456621 0.00663482 0.002212389 0.008163265 0.003229279 0.012121212 0.004109589 0.014347202 0.003623188 0 0.003325021 0.006024096 0 0 0 0 0 0 0 0.003311258 0 0 0 0 0.004545455 0.011371237 NA 0.010989011 0.014492754 0 0.006637168 0 0.007518797 0 0.006302521 0.0078125 0.007246377
452R 0.025889968 0.003690037 0.014545455 0 NA 0 0.004327131 0 0.014285714 NA NA NA NA NA NA NA NA NA NA NA NA NA 0.043643264 0.020833333 0.063829787 0.106382979 0.09787234 0.0625 0.013289037 0.056953642 0 0 0 0.007692308 0.009090909 0.02006689 0.004140787 NA NA NA NA NA NA NA NA NA NA
455F 0.004854369 0.007380074 0.010909091 0.02739726 0.062992126 0 0.027260926 0.01754386 0 0.005714286 0.00456621 0.013269639 0.017699115 0.036734694 0.016146394 0.03030303 0.01369863 0.018651363 0.027173913 0 0.021612635 0.018072289 0.011385199 0.020833333 0.021276596 0 0.025531915 0.03125 0.016611296 0.027152318 0 0 0 0.007692308 0.013636364 0.019397993 0.020703934 0 0 0 0.006637168 0 0.007518797 0 0.004201681 0.00390625 0
455S 0 0 0 0 0 0 0.001298139 0.00877193 0 0 0 0 0 0 0 0 0 0 0 0.004 0.00166251 0 0.018975332 0.041666667 0 0.021276596 0.021276596 0.041666667 0.016611296 0.051655629 0 0.085106383 0 0.007692308 0.004545455 0.003344482 0.002070393 0.010989011 0.007246377 0 0 0 0 0 0.00210084 0 0
463R 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.004255319 0 0 0.00397351 0 0 0 0.038461538 0.004545455 0.005351171 0.002070393 0 0 0 0 0 0 0 0 0 0
463S 0.011326861 0.011070111 0.014545455 0.010273973 0 0 0.005192557 0.00877193 0 0.011428571 0.01826484 0.015392781 0.008849558 0.004081633 0.009687836 0 0.010958904 0.017216643 0.014492754 0.016 0.009143807 0.024096386 0.001897533 0 0 0.021276596 0.017021277 0.041666667 0.003322259 0.020529801 0 0.042553191 0.022222222 0.084615385 0.009090909 0.018729097 0.01242236 0 0 0 0.002212389 0 0 0 0 0.00390625 0
463T 0 0 0 0 0 0 0 0 0 0 0.00456621 0 0 0 0 0 0 0 0 0 0 0 0.001897533 0 0 0.021276596 0.004255319 0.03125 0 0.02781457 0 0 0.066666667 0.069230769 0.009090909 0.016722408 0.022774327 0 0.007246377 0 0 0 0 0 0 0 0
477I 0.017799353 0.014760148 0.003636364 0.01369863 0.023622047 0 0.009952402 0 0.014285714 0.005714286 0.02739726 0.025477707 0.013274336 0.016326531 0.026910657 0.024242424 0.015068493 0.014347202 0.023550725 0.016 0.018287614 0.024096386 0 0 0 0 0.004255319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
477N 0.017799353 0.033210332 0.014545455 0.010273973 0.007874016 0 0.003894418 0.00877193 0 0.005714286 0.00913242 0.003450106 0.004424779 0.004081633 0.003229279 0 0.002739726 0.005738881 0 0 0.004156276 0 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA
478I 0.003236246 0.003690037 0.003636364 0.010273973 0.007874016 0 0.009086975 0 0.042857143 0 0 0.001326964 0 0 0.002152853 0.006060606 0.002739726 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.001337793 0.00621118 0 0 0 0.006637168 0 0.007518797 0 0.00210084 0.005859375 0.014492754
478R 0.001618123 0 0.003636364 0 0 0.04 0 0 0 0 0.00456621 0.001061571 0.004424779 0 0.002152853 0 0.001369863 0.00286944 0.005434783 0 0.00166251 0 0 0 0 0 0 0 0.006644518 0.003311258 0 0.021276596 0 0.015384615 0.027272727 0.010702341 0.014492754 0 0 0 0.017699115 0.028985507 0.007518797 0 0.021008403 0.013671875 0.036231884
479L 0.003236246 0 0.003636364 0.006849315 0 0 0.004759844 0 0 0.034285714 0.01369863 0.012473461 0.013274336 0.016326531 0.021528525 0.006060606 0.016438356 0.008608321 0.025362319 0.012 0.009143807 0.009036145 0 0 0 0.021276596 0 0 0.003322259 0.001324503 0 0 0 0.007692308 0 0.003344482 0.008281573 0.010989011 0.014492754 0 0.011061947 0.007246377 0 0 0.010504202 0.005859375 0.014492754
479S 0.008090615 0.014760148 0.007272727 0.006849315 0.015748031 0 0.014279533 0.00877193 0 0 0.01369863 0.018842887 0.015486726 0.008163265 0.032292788 0.006060606 0.021917808 0.018651363 0.016304348 0.02 0.023275145 0.012048193 0 0 0.021276596 0 0 0 0 0.002649007 0.01369863 0 0 0 0.009090909 0.003344482 0 0.010989011 0 0 0 0.007246377 0.015037594 0 0 0 0
484K 0.022653722 0.022140221 0.061818182 0.023972603 0.007874016 NA 0.03202077 NA NA 0.005714286 0.00456621 0.006900212 0.006637168 0.004081633 0.005382131 0 0.009589041 0.008608321 0.005434783 0.008 0.005818786 0.015060241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
484Q 0.017799353 0.018450185 0.021818182 0.017123288 0.015748031 0 0.009519688 0.00877193 0 0.011428571 0.01369863 0.014861996 0.013274336 0.008163265 0.019375673 0.018181818 0.021917808 0.021520803 0.009057971 0.004 0.012468828 0.012048193 0.001897533 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
484V 0.003236246 0 0 0 0 0 0 0 0 0 0 0.002388535 0.002212389 0.008163265 0.004305705 0.006060606 0.001369863 0.004304161 0.001811594 0.004 0.003325021 0.006024096 0.049335863 0.083333333 0.042553191 0.042553191 0.046808511 0.052083333 0.043189369 0.070198675 0.02739726 0.14893617 0 0.007692308 0.013636364 0.020735786 0.022774327 0.032967033 0.028985507 0.016393443 0.028761062 0.007246377 0.030075188 0.036363636 0.035714286 0.025390625 0.028985507
494L 0.014563107 0.014760148 0.007272727 0.003424658 0 0 0.000865426 0 0 0.022857143 0.04109589 0.027600849 0.013274336 0.032653061 0.033369214 0.024242424 0.030136986 0.024390244 0.025362319 0.016 0.023275145 0.018072289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.007246377 0 0 0.007246377 0 0 0 0.001953125 0
494P 0.03236246 0.05904059 0.04 0.054794521 0.039370079 0 0.0263955 0.00877193 0.028571429 0.017142857 0.01826484 0.011942675 0.017699115 0.024489796 0.009687836 0.018181818 0.017808219 0.014347202 0.014492754 0.02 0.02244389 0.012048193 0.022770398 0 0 0 0.008510638 0.010416667 0.019933555 0.039735099 0.02739726 0 0.088888889 0.1 0.059090909 0.077591973 0.047619048 0.021978022 0.014492754 0.032786885 0.022123894 0.028985507 0.030075188 0.036363636 0.033613445 0.01953125 0.050724638
522P 0.001618123 0.007380074 0.003636364 0 0.015748031 0 0.002596279 0 0.014285714 0 0.00913242 0.003450106 0.004424779 0.004081633 0.007534984 0 0.001369863 0.00286944 0.001811594 0.004 0.003325021 0 0.009487666 0 0 0 0.021276596 0.03125 0.003322259 0.008609272 0 0.085106383 0 0 0.004545455 0.00735786 0.008281573 0 0.007246377 0.032786885 0.002212389 0 0.007518797 0 0.006302521 0.00390625 0.007246377
522S 0.024271845 0.029520295 0.036363636 0.010273973 0.023622047 0 0.011683254 0 0.014285714 0 0.00913242 0.015658174 0.008849558 0 0.005382131 0.006060606 0.009589041 0.010043042 0.005434783 0.02 0.012468828 0.024096386 0.007590133 0 0 0 0.004255319 0 0.003322259 0.00397351 0 0 0 0.007692308 0 0.004682274 0.004140787 0.010989011 0 0.016393443 0.008849558 0.014492754 0 0 0.014705882 0.009765625 0
522V 0.03236246 0.036900369 0.04 0.037671233 0.007874016 0.12 0.01384682 0.026315789 0.014285714 0.051428571 0.00456621 0.019373673 0.015486726 0.040816327 0.01722282 0.012121212 0.023287671 0.025824964 0.016304348 0.036 0.029093932 0.024096386 0.055028463 0.020833333 0.021276596 0.042553191 0.063829787 0.020833333 0.019933555 0.022516556 0.01369863 0 0.022222222 0.023076923 0.009090909 0.011371237 0.008281573 0 0.007246377 0 0.006637168 0 0 0.009090909 0.00210084 0 0