[Plotting question]: Pair-plot #73
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| name: git-bob acting | |
| on: | |
| issues: | |
| types: [opened] | |
| issue_comment: | |
| types: | |
| - created | |
| pull_request: | |
| types: [opened, synchronize] | |
| pull_request_review_comment: | |
| types: [ created ] | |
| jobs: | |
| respond: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout main branch | |
| if: ${{ github.event.issue.pull_request == null }} # Only run if it's NOT a PR comment | |
| uses: actions/checkout@v3 | |
| - name: Checkout PR head branch | |
| if: ${{ github.event.issue.pull_request != null }} # Only run if it's a PR comment | |
| uses: actions/checkout@v3 | |
| with: | |
| ref: ${{ github.event.pull_request.head.ref }} # Checkout the PR head branch | |
| - name: Display the current branch | |
| run: git branch | |
| - name: Print pull request details | |
| run: | | |
| echo "Pull Request Number - ${{ github.event.pull_request.number }}" | |
| echo "github.event.issue.pull_request - ${{ github.event.issue.pull_request }}" | |
| echo "github.event.pull_request.head.ref - ${{ github.event.pull_request.head.ref }}" | |
| echo "github.event.issue.pull_request.head.ref - ${{ github.event.issue.pull_request.head.ref }}" | |
| echo "Organization - ${{ github.repository_owner }}" | |
| echo "Repository Name - ${{ github.repository }}" | |
| - name: Print Job details | |
| run: | | |
| echo "Run ID - ${{ github.run_id }}" | |
| echo "Run No - ${{ github.run_number }}" | |
| echo "Job - ${{ github.job }}" | |
| echo "Job ID - ${{ github.job_id }}" | |
| - name: Set up Python | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: 3.x | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -r requirements.txt | |
| - name: Install git-bob development version | |
| run: | | |
| git clone https://github.com/haesleinhuepf/git-bob.git | |
| cd git-bob | |
| #git fetch --all | |
| #git checkout -b development-0.11.0 origin/development-0.11.0 | |
| pip install -e . | |
| cd .. | |
| - name: Run git-bob | |
| env: | |
| ANTHROPIC_API_KEY: "${{ secrets.ANTHROPIC_API_KEY }}" | |
| GOOGLE_API_KEY: "${{ secrets.GOOGLE_API_KEY }}" | |
| GIT_BOB_LLM_NAME: "${{ secrets.GIT_BOB_LLM_NAME }}" | |
| OPENAI_API_KEY: "${{ secrets.OPENAI_API_KEY }}" | |
| GH_MODELS_API_KEY: "${{ secrets.GH_MODELS_API_KEY }}" | |
| GITHUB_API_KEY: "${{ secrets.GITHUB_TOKEN }}" | |
| GITHUB_RUN_ID: "${{ github.run_id }}" | |
| TWINE_USERNAME: "${{ secrets.TWINE_USERNAME }}" | |
| TWINE_PASSWORD: "${{ secrets.TWINE_PASSWORD }}" | |
| SYSTEM_MESSAGE: | | |
| You are an extremely skilled Bio-image Analyst python developer. Your name is git-bob. You are sometimes called github-actions bot. | |
| You can solve scientific image analysis and programming tasks and review code. | |
| ## Python specific instructions | |
| You preferably use the python libraries mentioned in the discussion. | |
| Create a Python Jupyter Notebooks containing the code we discussed. Always write notebooks, unless a user explictly mentions that they want a different format such as .py files. | |
| If you create images, show the results and save them in variables for later reuse. | |
| ## General instructions | |
| When asked to solve a specific problem, you keep your code changes minimal and only solve the problem at hand. | |
| You cannot retrieve information from other sources but from github.com. | |
| Do not claim anything that you don't know. | |
| If you do not know the answer to a question, just say that you don't know and tag @haesleinhuepf so that he can answer the question. | |
| In case you are asked to review code, you focus on the quality of the code. | |
| VISION_SYSTEM_MESSAGE: | | |
| You are a scientists with excellent skills when it comes to describing scientific images. When describing an image, you typically explain: | |
| * What is shown in the image. | |
| * If the image shows clearly distinct objects in its channels, these structures are listed for each channel individually. | |
| * You speculate how the image was acquired. | |
| run: | | |
| git-bob github-action ${{ github.repository }} ${{ github.event.pull_request.number }} ${{ github.event.issue.number }} |