Integrated pVACcompare into pVACtools#1203

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ldhtnp wants to merge 7 commits intogriffithlab:stagingfrom ldhtnp:pVACcompare_integration

+21,852-5

Commits on Feb 17, 2025

integrated pvaccompare into pvactools and added tests
ldhtnp
committed

Commits on Feb 18, 2025

removed specific deepdiff version
ldhtnp
committed

Commits on Feb 20, 2025

Commits on Feb 26, 2025

Commits on Feb 27, 2025

added entry# col, changed 'variants' to 'entries', fixed json list comparison, updated tests
ldhtnp
committed