try one with install in comman

gbouras13 · Feb 23, 2024 · 5d4dccd · 5d4dccd
1 parent eb60f94
commit 5d4dccd
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/tests/test_integration.py b/tests/test_integration.py
@@ -88,6 +88,8 @@ def test_install():
 def test_run_genbank():
     """test phold run with genbank input"""
     input_gbk: Path = f"{test_data}/combined_truncated_acr_defense_vfdb_card.gbk"
+    cmd = f"phold install -d {database_dir}"
+    exec_command(cmd)
     cmd = f"phold run -i {input_gbk} -o {run_gbk_dir} -t {threads} --cpu -d {database_dir} -f"
     exec_command(cmd)