Releases: ftwkoopmans/goat
Releases · ftwkoopmans/goat
release 1.1
save_genesets()
will also store an RData file so users can easily load a previous analysis and create plots thereof.- support gene sets from various organisms (besides human) via
load_genesets_go_fromfile()
andload_genesets_go_bioconductor()
. Note that one has to provide an input gene list that contains Entrez gene identifiers of the same species. download_genesets_goatrepo()
will automatically check the GitHub repository for the latest GO release if no specific date/version is provided.
release 1.0
This is the first public release, which is also available on CRAN
release 0.9.6
minor update that adds new features to the plot_lollipop()
function;
- alternatively create barplots (instead of lollipop)
- can now use either -log10 p-values (default) or oddsratio as x-axis values
- added color-coding for lollipops/barplots by up/down-regulation (useful if
test_genesets()
was used with parameter `score_type='effectsize' )
release 0.9.5
GOAT R package beta version 0.9.5