Small fixes #92
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Small fixes #92
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Note: It can happen that certain positions have no data e.g. auto-focus z-shift in CV acquisitions.
Codecov ReportAll modified and coverable lines are covered by tests ✅
Additional details and impacted files@@ Coverage Diff @@
## main #92 +/- ##
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Coverage 99.11% 99.11%
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Files 46 46
Lines 2701 2722 +21
Branches 266 268 +2
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+ Hits 2677 2698 +21
Misses 16 16
Partials 8 8 ☔ View full report in Codecov by Sentry. |
tibuch
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Apr 17, 2024
* Move create_zarr_plate out of converter.run.
* Check if tiles exist in lookup table.
Note: It can happen that certain positions have no data e.g. auto-focus z-shift in CV acquisitions.
* Call alignment on unaligned tiles.
* Prepare acquisitions to be flexible w.r.t. missing channel axis.
* Lowest z position in ImageXpress acquisitions is 1.
* Update coordinate transformation tests.
* Add test for get axes with only a single channel.
* Update converter tests to create the plate before calling run.
* Add a test with empty chunks.
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Fixes #91.