tests

Use poetry install in CI tests #35

	name: tests
	on:
	push:
	paths-ignore:
	- '**.md'
	- 'docs/**'
	- '.gitignore'
	- '.pre-commit-config.yaml'
	- 'Makefile'
	jobs:
	tests:
	strategy:
	matrix:
	os: ['ubuntu-latest', 'macos-latest', 'windows-latest']
	python-version: ['3.6', '3.7', '3.8']
	fail-fast: false
	runs-on: ${{ matrix.os }}
	name: ${{ matrix.os }} - python ${{ matrix.python-version }}
	env:
	coverage: ${{ matrix.os == 'ubuntu-latest' && matrix.python-version == '3.8' }}
	steps:
	- name: Check out repository
	uses: actions/checkout@v2
	- name: Install poetry
	uses: snok/install-poetry@v1
	- name: Install conda environment
	uses: mamba-org/setup-micromamba@v1
	with:
	environment-name: test
	create-args: >-
	python=${{ matrix.python-version }}
	gdal=3.2.0
	- name: Install dependencies
	shell: bash -l {0}
	run: \|
	conda activate test
	poetry install --no-interaction --all-extras
	- name: Lint
	shell: bash -l {0}
	run: \|
	conda activate test
	flake8 src tests
	- name: Test
	if: env.coverage == 'false'
	shell: bash -l {0}
	run: \|
	conda activate test
	pytest --doctest-modules src tests
	env:
	MPLBACKEND: agg
	- name: Test with coverage
	if: env.coverage == 'true'
	shell: bash -l {0}
	run: \|
	conda activate test
	pytest --cov --doctest-modules src tests
	env:
	MPLBACKEND: agg
	- name: Upload coverage to Codecov
	if: env.coverage == 'true'
	shell: bash -l {0}
	run: \|
	conda activate test
	coverage xml --fail-under=0
	codecov
	env:
	CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}

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