BH 1.84.0-0 Pre-Relase with Boost 1.84.0 (#98)

* Boost 1.84.0 (unmodified) * Standard filename patch applied * Standard diagnostics patch applied * Patches for 'filename' and 'diagnostics' * Second set of diagnostics patches for 1.84.0 * Mark as pre-release 1.84.0-0
eddelbuettel · Dec 15, 2023 · 6fb6933 · 6fb6933
1 parent 6ae52dc
commit 6fb6933
Show file tree

Hide file tree

Showing 2,553 changed files with 75,487 additions and 79,090 deletions.
diff --git a/.github/workflows/ci.yaml b/.github/workflows/ci.yaml
@@ -20,7 +20,7 @@ jobs:
     runs-on: ${{ matrix.os }}
 
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
 
       - name: Get Script
         run: curl -OLs https://eddelbuettel.github.io/r-ci/run.sh && chmod 0755 run.sh

diff --git a/ChangeLog b/ChangeLog
@@ -1,3 +1,17 @@
+2023-12-15  Dirk Eddelbuettel  <edd@debian.org>
+
+	* DESCRIPTION (Version, Date):  Pre-Release 1.84.0-0
+
+	* .github/workflows/ci.yaml (jobs): Update to actions/checkout@v4
+
+2023-12-13  Dirk Eddelbuettel  <edd@debian.org>
+
+	* inst/include/boost/*: Upgraded to Boost 1.84, as usual with two
+	patch sets from CRAN demands on file path length and diagnostics
+	* local/patches/bh_1.84.0-0.diagnostics-two.patch: Added
+
+	* local/scripts/CreateBoost.sh: Update for 1.84.0, added url
+
 2023-01-17  Dirk Eddelbuettel  <edd@debian.org>
 
 	* DESCRIPTION (Version, Date): Release 1.81.0-1

diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,8 +1,8 @@
 Package: BH
 Type: Package
 Title: Boost C++ Header Files
-Version: 1.81.0-1
-Date: 2023-01-17
+Version: 1.84.0-0
+Date: 2023-12-15
 Author: Dirk Eddelbuettel, John W. Emerson and Michael J. Kane
 Maintainer: Dirk Eddelbuettel <edd@debian.org>
 Description: Boost provides free peer-reviewed portable C++ source 

diff --git a/inst/NEWS.Rd b/inst/NEWS.Rd
@@ -7,6 +7,13 @@
 \newcommand{\ghit}{\href{https://github.com/eddelbuettel/bh/issues/#1}{##1}}
 \newcommand{\ghpr}{\href{https://github.com/eddelbuettel/bh/pull/#1}{##1}}
 
+\section{Changes in version 1.84.0-0 (2023-12-15)}{
+  \itemize{
+    \item Pre-release to allow work on five affected packages
+    \item Upgrade to \boost 1.81.0 (\ghpr{87})
+  }
+}
+
 \section{Changes in version 1.81.0-1 (2023-01-17)}{
   \itemize{
     \item Upgrade to \boost 1.81.0 (\ghpr{87})

diff --git a/inst/include/boost/accumulators/framework/accumulator_set.hpp b/inst/include/boost/accumulators/framework/accumulator_set.hpp
@@ -54,14 +54,19 @@ namespace detail
         {
         }
 
+        accumulator_visitor(accumulator_visitor const &other)
+          : args(other.args)
+        {
+        }
+
         template<typename Accumulator>
         void operator ()(Accumulator &accumulator) const
         {
             accumulator(this->args);
         }
 
     private:
-        accumulator_visitor &operator =(accumulator_visitor const &);
+        BOOST_DELETED_FUNCTION(accumulator_visitor &operator =(accumulator_visitor const &))
         Args const &args;
     };
 

diff --git a/inst/include/boost/accumulators/framework/accumulators/droppable_accumulator.hpp b/inst/include/boost/accumulators/framework/accumulators/droppable_accumulator.hpp
@@ -34,6 +34,11 @@ namespace boost { namespace accumulators
             {
             }
 
+            add_ref_visitor(add_ref_visitor const &other)
+              : args_(other.args_)
+            {
+            }
+
             template<typename Accumulator>
             void operator ()(Accumulator &acc) const
             {
@@ -49,7 +54,7 @@ namespace boost { namespace accumulators
             }
 
         private:
-            add_ref_visitor &operator =(add_ref_visitor const &);
+            BOOST_DELETED_FUNCTION(add_ref_visitor &operator =(add_ref_visitor const &))
             Args const &args_;
         };
 
@@ -87,7 +92,7 @@ namespace boost { namespace accumulators
             }
 
         private:
-            drop_visitor &operator =(drop_visitor const &);
+            BOOST_DELETED_FUNCTION(drop_visitor &operator =(drop_visitor const &))
             Args const &args_;
         };
 
@@ -227,7 +232,7 @@ namespace boost { namespace accumulators
         }
 
     private:
-        with_cached_result &operator =(with_cached_result const &);
+        BOOST_DELETED_FUNCTION(with_cached_result &operator =(with_cached_result const &))
 
         void set(result_type const &r)
         {

diff --git a/inst/include/boost/accumulators/framework/depends_on.hpp b/inst/include/boost/accumulators/framework/depends_on.hpp
@@ -321,6 +321,12 @@ namespace boost { namespace accumulators
             {
             }
 
+            accumulator_wrapper& operator=(accumulator_wrapper const &that)
+            {
+                *static_cast<Accumulator *>(this) = *static_cast<Accumulator const *>(&that);
+                return *this;
+            }
+
             template<typename Args>
             accumulator_wrapper(Args const &args)
               : Accumulator(args)

diff --git a/inst/include/boost/accumulators/statistics/count.hpp b/inst/include/boost/accumulators/statistics/count.hpp
@@ -45,8 +45,8 @@ namespace impl
 
         // make this accumulator serializeable
         template<class Archive>
-        void serialize(Archive & ar, const unsigned int file_version)
-        { 
+        void serialize(Archive & ar, const unsigned int /* file_version */)
+        {
             ar & cnt;
         }
 

diff --git a/inst/include/boost/accumulators/statistics/extended_p_square_quantile.hpp b/inst/include/boost/accumulators/statistics/extended_p_square_quantile.hpp
@@ -76,6 +76,7 @@ namespace impl
                 boost::begin(args[extended_p_square_probabilities])
               , boost::end(args[extended_p_square_probabilities])
             )
+          , probability()
         {
         }
 

diff --git a/inst/include/boost/accumulators/statistics/max.hpp b/inst/include/boost/accumulators/statistics/max.hpp
@@ -50,8 +50,8 @@ namespace impl
 
         // make this accumulator serializeable
         template<class Archive>
-        void serialize(Archive & ar, const unsigned int file_version)
-        { 
+        void serialize(Archive & ar, const unsigned int /* file_version */)
+        {
             ar & max_;
         }
 

diff --git a/inst/include/boost/accumulators/statistics/mean.hpp b/inst/include/boost/accumulators/statistics/mean.hpp
@@ -44,7 +44,7 @@ namespace impl
 
         // serialization is done by accumulators it depends on
         template<class Archive>
-        void serialize(Archive & ar, const unsigned int file_version) {}
+        void serialize(Archive & /* ar */, const unsigned int /* file_version */) {}
     };
 
     template<typename Sample, typename Tag>
@@ -76,8 +76,8 @@ namespace impl
         }
 
         template<class Archive>
-        void serialize(Archive & ar, const unsigned int file_version)
-        { 
+        void serialize(Archive & ar, const unsigned int /* file_version */)
+        {
             ar & mean;
         }
 

diff --git a/inst/include/boost/accumulators/statistics/min.hpp b/inst/include/boost/accumulators/statistics/min.hpp
@@ -50,8 +50,8 @@ namespace impl
 
         // make this accumulator serializeable
         template<class Archive>
-        void serialize(Archive & ar, const unsigned int file_version)
-        { 
+        void serialize(Archive & ar, const unsigned int /* file_version */)
+        {
             ar & min_;
         }
 

diff --git a/inst/include/boost/accumulators/statistics/moment.hpp b/inst/include/boost/accumulators/statistics/moment.hpp
@@ -77,8 +77,8 @@ namespace impl
 
         // make this accumulator serializeable
         template<class Archive>
-        void serialize(Archive & ar, const unsigned int file_version)
-        { 
+        void serialize(Archive & ar, const unsigned int /* file_version */)
+        {
             ar & sum;
         }
 

diff --git a/inst/include/boost/accumulators/statistics/sum.hpp b/inst/include/boost/accumulators/statistics/sum.hpp
@@ -52,8 +52,8 @@ namespace impl
         }
 
         template<class Archive>
-        void serialize(Archive & ar, const unsigned int file_version)
-        { 
+        void serialize(Archive & ar, const unsigned int /* file_version */)
+        {
             ar & sum;
         }
 

diff --git a/inst/include/boost/accumulators/statistics/tail.hpp b/inst/include/boost/accumulators/statistics/tail.hpp
@@ -88,7 +88,7 @@ namespace detail
         }
 
     private:
-        stat_assign_visitor &operator =(stat_assign_visitor const &);
+        BOOST_DELETED_FUNCTION(stat_assign_visitor &operator =(stat_assign_visitor const &))
         Args const &args;
         std::size_t index;
     };
@@ -264,7 +264,7 @@ namespace impl
             }
 
         private:
-            indirect_cmp &operator =(indirect_cmp const &);
+            BOOST_DELETED_FUNCTION(indirect_cmp &operator =(indirect_cmp const &))
             std::vector<Sample> const &samples;
         };
 

diff --git a/inst/include/boost/accumulators/statistics/variance.hpp b/inst/include/boost/accumulators/statistics/variance.hpp
@@ -56,7 +56,7 @@ namespace impl
 
         // serialization is done by accumulators it depends on
         template<class Archive>
-        void serialize(Archive & ar, const unsigned int file_version) {}
+        void serialize(Archive & /* ar */, const unsigned int /* file_version */) {}
     };
 
     //! Iterative calculation of variance.
@@ -119,8 +119,8 @@ namespace impl
 
         // make this accumulator serializeable
         template<class Archive>
-        void serialize(Archive & ar, const unsigned int file_version)
-        { 
+        void serialize(Archive & ar, const unsigned int /* file_version */)
+        {
             ar & variance;
         }
 

diff --git a/inst/include/boost/accumulators/statistics/weighted_mean.hpp b/inst/include/boost/accumulators/statistics/weighted_mean.hpp
@@ -99,7 +99,7 @@ namespace impl
 
         // make this accumulator serializeable
         template<class Archive>
-        void serialize(Archive & ar, const unsigned int file_version)
+        void serialize(Archive & ar, const unsigned int /* file_version */)
         { 
             ar & mean;
         }

diff --git a/inst/include/boost/accumulators/statistics/weighted_sum.hpp b/inst/include/boost/accumulators/statistics/weighted_sum.hpp
@@ -57,7 +57,7 @@ namespace impl
 
         // make this accumulator serializeable
         template<class Archive>
-        void serialize(Archive & ar, const unsigned int file_version)
+        void serialize(Archive & ar, const unsigned int /* file_version */)
         {
             ar & weighted_sum_;
         }

diff --git a/inst/include/boost/algorithm/gather.hpp b/inst/include/boost/algorithm/gather.hpp
@@ -1,4 +1,4 @@
-/* 
+/*
     Copyright 2008 Adobe Systems Incorporated
 
    Distributed under the Boost Software License, Version 1.0. (See accompanying
@@ -84,7 +84,7 @@ namespace boost { namespace algorithm {
 template <
     typename BidirectionalIterator,  // models BidirectionalIterator
     typename Pred>                   // models UnaryPredicate
-std::pair<BidirectionalIterator, BidirectionalIterator> gather 
+std::pair<BidirectionalIterator, BidirectionalIterator> gather
         ( BidirectionalIterator first, BidirectionalIterator last, BidirectionalIterator pivot, Pred pred )
 {
 //  The first call partitions everything up to (but not including) the pivot element,
@@ -106,11 +106,11 @@ template <
     typename BidirectionalRange,    //
     typename Pred>                  // Pred models UnaryPredicate
 std::pair<
-    typename boost::range_iterator<const BidirectionalRange>::type,
-    typename boost::range_iterator<const BidirectionalRange>::type>
+    typename boost::range_iterator<BidirectionalRange>::type,
+    typename boost::range_iterator<BidirectionalRange>::type>
 gather (
-    const BidirectionalRange &range,
-    typename boost::range_iterator<const BidirectionalRange>::type pivot,
+    BidirectionalRange &range,
+    typename boost::range_iterator<BidirectionalRange>::type pivot,
     Pred pred )
 {
     return boost::algorithm::gather ( boost::begin ( range ), boost::end ( range ), pivot, pred );
-Original file line number
+Diff line change
@@ Expand Up / @@ -76,6 +76,7 @@ namespace impl @@
                     boost::begin(args[extended_p_square_probabilities])
                   , boost::end(args[extended_p_square_probabilities])
                 )
+              , probability()
             {
             }
@@ Expand Down @@