Remove SRA download workflow call

drpatelh · Jun 9, 2021 · 5cb43a1 · 5cb43a1
1 parent 909bd6d
commit 5cb43a1
Showing 1 changed file with 0 additions and 7 deletions.
diff --git a/main.nf b/main.nf
@@ -49,13 +49,6 @@ WorkflowMain.initialise(workflow, params, log)
 
 workflow NFCORE_VIRALRECON {
 
-    //
-    // WORKFLOW: Get SRA run information for public database ids, download and md5sum check FastQ files, auto-create samplesheet
-    //
-    if (params.public_data_ids) {
-        include { SRA_DOWNLOAD } from './workflows/sra_download'
-        SRA_DOWNLOAD ()
-
     //
     // WORKFLOW: Variant and de novo assembly analysis for Illumina data
     //