Fix AutotoolsToolchain extraflags priority #15005
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Changelog: Fix: Fix AutotoolsToolchain extraflags priority.
Docs: conan-io/docs#3451
Closes: #14991
The order when adding extra flags was not correct we want that the ones provided in the conf have the greater priority in case you want to override anything. This is coherent with CMakeToolchain (see #14966 (comment))