Code

switch to new backend#168

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StRigaud merged 153 commits intomasterclEsperanto/CLIc:masterfrom add-cuda-backendclEsperanto/CLIc:add-cuda-backendCopy head branch name to clipboardAug 28, 2023

+10,416-28,461

Commits

Commits on Jul 5, 2023

• switch to new backend

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• add max all pixel tier2

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Commits on Jul 6, 2023

• add general include

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• update test absolut max_proj_x and max_all_pixels

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Commits on Jul 10, 2023

• fix: typo

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• fix: missing arg t1 func

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• add backendmanager method

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• test CUDA::toolkit .. failed

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• fix: test backend cuda enable

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• add device type in getInfo

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• style: add space

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• style invert type and device name in << op

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• add output to maximum_all_pixel

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• update test

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• style: naming

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• update test

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• add cmath for access to m_PI

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• add missing tier1

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• tier2 first batch of kernel

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Commits on Jul 11, 2023

• fix: gamma function get max int

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• update some tests

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• update backend selection behaviour

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• add missing func radius2kernelsize

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• fix: tier1 function call

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• fix: backend selection logic

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• update all test to new api and backend

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Commits on Jul 12, 2023

• remove test on int64

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• update test and gaussian_blur

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• test gaussian

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• plot output to check

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• test again

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• test 2

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• test 3

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• test 4

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• update ci ocl-icd installation

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• update for CI

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• put back the sudo

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• update with ignore-errors

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• test coverage with gcovr instead of lcov

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• add #define _USE_MATH_DEFINES

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• update cmake dependency logic

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• redefine m_pi for portability

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• update dependencies

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• remove comment

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• rm comment for autogen

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• remove comment

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• clean

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• rm duplicate

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• clean

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Commits on Jul 17, 2023

• add debug message

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• debug

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• clean up + debug

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• set shared lib by default

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• update rpath build and install

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• set CUDA to OFF for testing

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• back to CUDA ON

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• fix: redifinition of M_PI

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Commits on Jul 19, 2023

• add 2 new output creation function

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• add new functions

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• enables tiers up to 5

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• update existing test

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• fix left over error

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  3d595b2

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• cleanup

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Commits on Jul 20, 2023

• clean up

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• add otsu

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• add dtype to output creation logic

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• fix: min,max,sum

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Commits on Jul 21, 2023

• add kernel cache system for ocl

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• add new dst tier0

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• add new tiers functions

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• rm obsolete

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• update to shell

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  f98f743

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• cleaner

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• update script

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  6b68a65

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• fix typo

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• add reciprocal

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• fix: replace float by int

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• missing comma

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• cclb offset set to 1

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• test: kill cclb while loop

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• test cclb

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• test: no relabeled

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• wrong copy direction

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• enforce int64 label

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• use float because cuda fail with int64

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Commits on Jul 24, 2023

• add: setWaitToFinish method

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• update output creation

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• add new func tier1

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• fix: warnings

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• set -Wall and -Werror if Debug

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• fix: warnings

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• fix: warnings

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  d769175

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• add: new func

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  ecf24d8

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• fix format

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• set fail fast

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• test if still failling

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• add extend_labeling_via_voronoi

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• add: mask voronoi

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• add otsu voronoi

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  5a25e69

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• fix: typos and errors

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  bc731bd

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• force int32 dst

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• set temp data to float

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• fix diamond

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• set flag to 1

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• plot temp dst

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• back to start

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Commits on Jul 25, 2023

• enh: improve error message with log

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• fix: mising _func suffix

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• fix: use uint32 for temp data type

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  354ea8d

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• add: tier6 and 7 to build

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• add: tests

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• update tests

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• fix: wrong input

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• fix: force float for gaussian blur

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  88ce412

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• fix: project x return shape z,y instead of y,z

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  71d0f77

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• clean format

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• fix typo

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Commits on Jul 26, 2023

• update default value

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• add new functionalities

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• ADD: block and grid functions

  

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• FIX: code format

  

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Commits on Jul 27, 2023

• enforce default type

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• update tests

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• enable cuda

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• using regex for code replacement

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  9be2b2d

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• cleanup

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  4efe3c4

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• add read from coord

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  a11f088

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• fix: typo

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  b7760a7

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• add new kernel

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• update header for future kernel

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• add exclude edges label

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• fix: wrong names

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• set otsu output to uint8

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• change default output type

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• fix: update test output type

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• fix: exclude edges

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  90a24b1

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• clean up

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• remove uneeded tier

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Commits on Jul 28, 2023

• Merge branch 'clEsperanto:add-cuda-backend' into add-cuda-backend

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Commits on Aug 1, 2023

• add median filter

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• add constant for median

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Commits on Aug 3, 2023

• update range_func

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• add std funcs

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Commits on Aug 6, 2023

• add median, multiply coord, minimim in mask

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• add minimum in mask

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• bbox and center of mass

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• correct range utils func

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Commits on Aug 7, 2023

• add minimum_mask_pixels test

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• enh: improve log

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• fix: kernel algo

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Commits on Aug 16, 2023

• add exclude labels func

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Commits on Aug 21, 2023

• test patch win c++17

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Commits on Aug 22, 2023

• Merge pull request #171 from CherifMZ/add-cuda-backend

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