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Testing quotations
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dwest77a committed Jan 25, 2024
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Expand Up @@ -45,8 +45,7 @@ Running for a group of datasets

Run all multi-dataset group processes within the pipeline using the `group_run.py` script.

```
usage: group_run.py [-h] [-s SOURCE] [-e VENVPATH] [-w WORKDIR] [-g GROUPDIR] [-p PROJ_DIR] [-n NEW_VERSION] [-m MODE] [-t TIME_ALLOWED] [-b] [-i INPUT] [-S SUBSET] [-r REPEAT_ID] [-f] [-v] [-d] [-Q] phase groupID
`usage: group_run.py [-h] [-s SOURCE] [-e VENVPATH] [-w WORKDIR] [-g GROUPDIR] [-p PROJ_DIR] [-n NEW_VERSION] [-m MODE] [-t TIME_ALLOWED] [-b] [-i INPUT] [-S SUBSET] [-r REPEAT_ID] [-f] [-v] [-d] [-Q] phase groupID`

positional arguments:
phase Phase of the pipeline to initiate
Expand Down Expand Up @@ -77,5 +76,4 @@ options:
-f Force overwrite of steps if previously done
-v, --verbose Print helpful statements while running
-d, --dryrun Perform dry-run (i.e no new files/dirs created)
-Q, --quality Quality assured checks - thorough run
```
-Q, --quality Quality assured checks - thorough run

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