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Fix HDF5 and NWB get_frames behavior#174

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CodyCBakerPhD merged 19 commits intomaincatalystneuro/roiextractors:mainfrom fix_hdf5_get_framescatalystneuro/roiextractors:fix_hdf5_get_framesCopy head branch name to clipboardFeb 1, 2024

+20-22

Commits

Commits on Jul 8, 2022

• for HDF5:

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  bendichter

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• [pre-commit.ci] auto fixes from pre-commit.com hooks

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Commits on Jul 19, 2022

• Merge branch 'master' into fix_hdf5_get_frames

  h-mayorquin

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  f71afcb

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Commits on Jan 30, 2024

• Merge branch 'main' into fix_hdf5_get_frames

  pauladkisson

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  cfcc121

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• Added integer handling to default get_frames method

  pauladkisson

  authored
  ea67c66

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• added squeeze logic to get_frames

  pauladkisson

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  a7eb0c6

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• specify axis for squeeze

  pauladkisson

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  1d23640

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Commits on Jan 31, 2024

• inverted if so that squeeze occurs in the int section

  pauladkisson

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  a2caa4e

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• removed np.newaxis so that bruker tests expect squeezing behavior on single frame

  pauladkisson

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  96d872a

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• removed np.newaxis so that micromanager tests expect squeezing behavior on single frame

  pauladkisson

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• added squeeze logic to multiimaging

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  pauladkisson

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• reverted imagingextractor changes

  pauladkisson

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• reverted multiimagingextractor and testing.py changes

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• reverted test_brukertiffimagingextractor changes

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• reverted test_micromanagertiffimagingextractor changes

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• reverted test_brukertiffimagingextractor changes

  pauladkisson

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  251b515

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• added get_frames to hdf5imagingextractor

  pauladkisson

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Commits on Feb 1, 2024

• added test for non-cts frames

  pauladkisson

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  dabcada

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• fixed nwb get_frames

  pauladkisson

  committed
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