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A python tool to process lists of phenotypes (or similar tabular data)

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Phenotool

Organize sample information for GWAS analyses.

Read column-based sample information and perform simple sorting, filtering and transformations on phenotype values. Outputs sample information in formats appropriate for popular GWAS tools including Snptest, RVtest and Plink.

Install using pip: pip install git+https://github.com/carsten0202/phenotool

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A python tool to process lists of phenotypes (or similar tabular data)

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