Merge branch 'hotfix/1.13.5'

cancerit · Sep 9, 2018 · 9dcb034 · 9dcb034
2 parents df19022 + 6a2b57f
commit 9dcb034
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Showing 3 changed files with 5 additions and 2 deletions.
diff --git a/CHANGES.md b/CHANGES.md
@@ -1,5 +1,9 @@
 # CHANGES
 
+## 1.13.5
+
+* Remove printf that causes all contigs to be printed to stderr.
+
 ## 1.13.4
 
 * Fix incorrect file path introduced in 1.13.3

diff --git a/Makefile b/Makefile
@@ -1,4 +1,4 @@
-CAVEMAN_VERSION=1.13.4
+CAVEMAN_VERSION=1.13.5
 TEST_REF?=""
 #Compiler
 CC?=gcc

diff --git a/src/fai_access.c b/src/fai_access.c
@@ -79,7 +79,6 @@ int fai_access_get_count_length_all_contigs(char *fa_loc, int *count, int *total
 	while(fgets(rd, 1000, fai) != NULL){
 		check(rd != NULL,"Invalid line read\n");
         *count = *count+1;
-        fprintf(stderr,"********** %s\n", rd);
 		int chk = sscanf(rd,"%s\t%d\t%*d\t%*d\t%*d",chr_name,&length);
 		check(chk == 2,"Wrong number of entries (%d) found in fasta index file line %s",chk,rd);
         *total_len += strlen(chr_name);