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FIX: remove genomad functionality #21

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merged 2 commits into from
Oct 25, 2024

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@misialq misialq commented Oct 25, 2024

This PR removes the geNomad functionality as the package itself seems to be incompatible with the rest of the pathogenome distro (likely a dependency conflict through tensorflow).

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codecov bot commented Oct 25, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 98.23%. Comparing base (284245c) to head (cf2132e).
Report is 15 commits behind head on main.

Additional details and impacted files
@@            Coverage Diff             @@
##             main      #21      +/-   ##
==========================================
+ Coverage   93.15%   98.23%   +5.08%     
==========================================
  Files          10       16       +6     
  Lines         146      396     +250     
==========================================
+ Hits          136      389     +253     
+ Misses         10        7       -3     

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@misialq misialq merged commit 1cffd5a into bokulich-lab:main Oct 25, 2024
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@misialq misialq deleted the Language-pathogenome-py310 branch October 25, 2024 20:57
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