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@article {Ziemski2022, | ||
author = {Ziemski, Michal and Adamov, Anja and Kim, Lina and Fl{\"o}rl, Lena and Bokulich, Nicholas A.}, | ||
author = {Ziemski, Michal and Adamov, Anja and Kim, Lina and Flörl, Lena and Bokulich, Nicholas A}, | ||
title = {Reproducible acquisition, management, and meta-analysis of nucleotide sequence (meta)data using q2-fondue}, | ||
year = {2022}, | ||
doi = {10.1101/2022.03.22.485322}, | ||
URL = {https://www.biorxiv.org/content/early/2022/03/25/2022.03.22.485322}, | ||
journal = {bioRxiv} | ||
month = {09}, | ||
doi = {10.1093/bioinformatics/btac639}, | ||
URL = {https://doi.org/10.1093/bioinformatics/btac639}, | ||
journal = {Bioinformatics}, | ||
issn = {1367-4803}, | ||
} | ||
|
||
@article{Buchmann2019, | ||
author = {Buchmann, Jan P and Holmes, Edward C}, | ||
doi = {10.1093/bioinformatics/btz385}, | ||
editor = {Wren, Jonathan}, | ||
journal = {Bioinformatics}, | ||
month = {nov}, | ||
number = {21}, | ||
pages = {4511--4514}, | ||
publisher = {Oxford University Press}, | ||
title = {Entrezpy: a Python library to dynamically interact with the NCBI Entrez databases}, | ||
url = {https://academic.oup.com/bioinformatics/article/35/21/4511/5488119}, | ||
volume = {35}, | ||
year = {2019} | ||
author = {Buchmann, Jan P and Holmes, Edward C}, | ||
doi = {10.1093/bioinformatics/btz385}, | ||
editor = {Wren, Jonathan}, | ||
journal = {Bioinformatics}, | ||
month = {nov}, | ||
number = {21}, | ||
pages = {4511--4514}, | ||
publisher = {Oxford University Press}, | ||
title = {Entrezpy: a Python library to dynamically interact with the NCBI Entrez databases}, | ||
url = {https://academic.oup.com/bioinformatics/article/35/21/4511/5488119}, | ||
volume = {35}, | ||
year = {2019} | ||
} | ||
|
||
@misc{SraToolkit, | ||
name = {SRA Toolkit}, | ||
author = {SRA Toolkit Development Team}, | ||
version = {2.9.6}, | ||
url = {https://trace.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?view=software} | ||
name = {SRA Toolkit}, | ||
author = {SRA Toolkit Development Team}, | ||
version = {2.9.6}, | ||
url = {https://trace.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?view=software} | ||
} | ||
|
||
@misc{stephan_hugel_2019_2917290, | ||
author = {Stephan Hügel and Peter Gerdes and Patrick Fournier and | ||
author = {Stephan Hügel and Peter Gerdes and Patrick Fournier and | ||
emuzie and Patrick Golden and jghauser and Stefan Frühwirth and | ||
Sean Takats and Pablo Orduña and Merlin and Erik Hetzner and | ||
Christian Brodbeck and Avram Lyon and A Lee}, | ||
title = {urschrei/pyzotero: Zenodo Release}, | ||
month = {may}, | ||
year = 2019, | ||
publisher = {Zenodo}, | ||
version = {v1.3.15}, | ||
doi = {10.5281/zenodo.2917290}, | ||
url = {https://doi.org/10.5281/zenodo.2917290} | ||
title = {urschrei/pyzotero: Zenodo Release}, | ||
month = {may}, | ||
year = 2019, | ||
publisher = {Zenodo}, | ||
version = {v1.3.15}, | ||
doi = {10.5281/zenodo.2917290}, | ||
url = {https://doi.org/10.5281/zenodo.2917290} | ||
} |