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Improve Table.collapse by roughly 10x #866

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merged 3 commits into from
Nov 20, 2021
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wasade
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@wasade wasade commented Nov 19, 2021

For collapses requiring high volumes of partitions, these changes empirically offered about a 10x reduction in runtime. In particular, this greatly improves performance for redbiom.fetch when merging samples.

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Looks great, thank you. Those improvements sounds exciting!

@antgonza antgonza merged commit db7aae7 into biocore:master Nov 20, 2021
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wasade commented Nov 22, 2021

thanks!

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