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Bump bowtie2 version to 2.3.5 #14263

Merged
merged 1 commit into from
Apr 1, 2019
Merged

Bump bowtie2 version to 2.3.5 #14263

merged 1 commit into from
Apr 1, 2019

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dpryan79
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@dpryan79 dpryan79 commented Apr 1, 2019

ℹ️
Bioconda has finished the GCC7 migration. If you are dealing with C/C++ or Python package it can be that you need to rebuild other dependent packages. Bioconda utils - update-pinning will assist you with that. If you have any questions please use issue 13578.


  • I have read the guidelines for bioconda recipes.
  • This PR adds a new recipe.
  • AFAIK, this recipe is directly relevant to the biological sciences (otherwise, please submit to the more general purpose conda-forge channel).
  • This PR updates an existing recipe.
  • This PR does something else (explain below).

@dpryan79 dpryan79 merged commit 3c0f85b into master Apr 1, 2019
@dpryan79 dpryan79 deleted the bowtie2-2.3.5 branch April 1, 2019 13:31
@heuermh
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heuermh commented Feb 10, 2020

@dpryan79 Might you be able to create a PR to bump bowie2 to version 2.3.5.1?

We run into issue BenLangmead/bowtie2#240 which appears to have been fixed in https://github.com/BenLangmead/bowtie2/releases/tag/v2.3.5.1.

Thank you in advance!

@dpryan79
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@heuermh bowtie2 2.3.5.1 should now be available in conda and I've changed where we source bowtie2 releases so we should automatically pick up new (non-beta) ones now.

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heuermh commented Feb 11, 2020

Great! Thank you, @dpryan79

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2 participants