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RNASeq, TermSeq, TSS, RIboSeq clean data creation and display #10

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drbecavin opened this issue Apr 10, 2019 · 2 comments
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RNASeq, TermSeq, TSS, RIboSeq clean data creation and display #10

drbecavin opened this issue Apr 10, 2019 · 2 comments
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bug Something isn't working Data Model Everything related to java datamodel Genome Viewer

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@drbecavin
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TSS and TermSeq creation are Listeria specific for the moment

TSS.createTSS(exp);
TermSeq.createTermSeq(exp);

Change that and make it uniform with the way RNASeq are read.
Need to manage:

  • .bed files for TSS and TermSeq
  • WIG files for RNASeq and RibosSeq
  • Count files for RNASeq
@drbecavin drbecavin added bug Something isn't working Data Model Everything related to java datamodel Genome Viewer labels Apr 10, 2019
@drbecavin
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It has been modified.
Everything is an 'NGS' object now.
The visualization has to be fixed !

@drbecavin
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Visualization fixed !

drbecavin added a commit to drbecavin/bacnet-private that referenced this issue Apr 23, 2019
@drbecavin
Modify TSS and TermSeq creation and viz. Everything is NGS data now. …
d7de9ab 
…Issue becavin-lab#10 closed
@drbecavin drbecavin mentioned this issue Apr 23, 2019
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@drbecavin drbecavin mentioned this issue Jun 11, 2019
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@drbecavin drbecavin mentioned this issue Aug 5, 2019
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@drbecavin