Closes #221 Removes suggested packages and update CI actions #682
Workflow file for this run
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| --- | |
| # Workflow derived from https://github.com/r-lib/actions/tree/master/examples | |
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | |
| name: R-CMD-check 📦 | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| types: | |
| - opened | |
| - synchronize | |
| - reopened | |
| - ready_for_review | |
| branches: | |
| - main | |
| workflow_dispatch: | |
| jobs: | |
| R-CMD-check: | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
| runs-on: ${{ matrix.config.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - { os: macOS-latest, r: "release" } | |
| - { os: windows-latest, r: "release" } | |
| - { os: ubuntu-latest, r: "devel", http-user-agent: "release" } | |
| - { os: ubuntu-latest, r: "release" } | |
| - { os: ubuntu-latest, r: "oldrel-1" } | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| R_KEEP_PKG_SOURCE: yes | |
| if: > | |
| !contains(github.event.commits[0].message, '[skip checks]') | |
| steps: | |
| - name: Checkout repository 🛎 | |
| uses: actions/checkout@v4 | |
| - name: Install Pandoc | |
| uses: r-lib/actions/setup-pandoc@v2 | |
| - name: Setup R 📊 | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| http-user-agent: ${{ matrix.config.http-user-agent }} | |
| use-public-rspm: true | |
| - name: Install R package dependencies 📦 | |
| uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| extra-packages: any::rcmdcheck | |
| - name: Run R CMD check 🎯 | |
| uses: r-lib/actions/check-r-package@v2 | |
| check_admiral: | |
| name: Check (admiral) | |
| uses: pharmaverse/admiralci/.github/workflows/r-cmd-check.yml@main | |
| with: | |
| error-on: warning # TODO: find a way to ignore specific notes | |
| if: github.event_name == 'pull_request' |