PyPi version fails to install on Mac due to '#include <malloc.h>' in jly_3ddt.hpp file #3
Comments
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Did you try compiling yourself with Try and let me know if you still have difficulties. Regards, |
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Short follow up: I am trying to simplify the install process as I am packaging a script for inexperienced user. I learned they are using windows which I had hoped would simplify things. However a new issue arose again when using pip on windows. UnicodeDecodeError: 'charmap' codec can't decode byte 0x9d in position 3658: character maps to Any advice? running Windows 10 - python 3.8.5 |
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I believe it is coming from the description text. Just make it into a empty
string and try compiling
…On Mon, Aug 10, 2020 at 2:58 PM Connor Hazen ***@***.***> wrote:
Short follow up: I am trying to simplify the install process as I am
packaging a script for inexperienced user. I learned they are using windows
which I had hoped would simplify things. However a new issue arose again
when using pip.
UnicodeDecodeError: 'charmap' codec can't decode byte 0x9d in position
3658: character maps to
FOUND AUTOWRAP LIBRARY, PROCEED
PRECOMPILE USING AUTOWRAP BEFORE PROCEEDING
Autowrap has wrapped 4 classes, 13 methods and 0 enums
----------------------------------------
ERROR: Command errored out with exit status 1: python setup.py egg_info
Check the logs for full command output.
Any advice?
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No luck. Getting this error "error: command 'C:\Program Files (x86)\Microsoft Visual Studio\2019\BuildTools\VC\Tools\MSVC\14.27.29110\bin\HostX86\x64\cl.exe' failed with exit status 2". Any advice. Should I use a different compiler than visual studio, mingw etc |
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When manually compiling without visual studio "error: Microsoft Visual C++ 14.0 is required. Get it with "Build Tools for Visual Studio": https://visualstudio.microsoft.com/downloads/" |
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Hi, Did you try installing through pip? Was README.md not useful? Did it not work correctly? Can you share more information to debug this problem? Looks like you don't have C++ 14.0. Install the compiler and the package should compile for you Regards, |
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Tried pip installation. Error is still thrown. Currently running on 3.8.2 windows 10 with visual studio build tools and c++ compiler for 14.27. |
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I cannot magically solve this problem unless you share the complete error
logs. I can only keep guessing
…On Tue, Aug 11, 2020, 9:43 PM Connor Hazen ***@***.***> wrote:
Tried pip installation. Error is still thrown. Currently running on 3.8.2
windows 10 with visual studio build tools and c++ compiler for 14.27.
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** Pip Install on conda VM:** pip install py-goicp --user Manual Compile: python setup.py build_ext --inplace |
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Great and thanks for the error logs. I believe the pip install fails
because of the encoding error with Windows. But the manual compilation
looks fine. I guess the Python headers aren't setup the right way. Try to
install anaconda and try that maybe? I had some users complaining about
this in the past for Windows 10. However, I was about to compile (both pip
and manual) without issues on Windows 10. Or try fixing the Python headers
Check this link
1-
https://stackoverflow.com/questions/40018405/cannot-open-include-file-io-h-no-such-file-or-directory
2- Jonathan-LeRoux/lws#4
Most probably it looks like Windows SDK not in path. You are almost there
and in my opinion this is merely an issue with paths in your Windows
system.
Regards,
#0K
…On Tue, Aug 11, 2020, 10:20 PM Connor Hazen ***@***.***> wrote:
*Install on conda VM:*
pip install py-goicp --user
Collecting py-goicp
Using cached py_goicp-0.0.4.tar.gz (40 kB)
ERROR: Command errored out with exit status 1:
command: 'C:\Users\19707\miniconda3\python.exe' -c 'import sys,
setuptools, tokenize; sys.argv[0] =
'"'"'C:\Users\19707\AppData\Local\Temp\pip-install-7d74ami2\py-goicp\setup.py'"'"';
*file*='"'"'C:\Users\19707\AppData\Local\Temp\pip-install-7d74ami2\py-goicp\setup.py'"'"';f=getattr(tokenize,
'"'"'open'"'"', open)(*file*);code=f.read().replace('"'"'\r\n'"'"',
'"'"'\n'"'"');f.close();exec(compile(code, *file*, '"'"'exec'"'"'))'
egg_info --egg-base
'C:\Users\19707\AppData\Local\Temp\pip-install-7d74ami2\py-goicp\pip-egg-info'
cwd: C:\Users\19707\AppData\Local\Temp\pip-install-7d74ami2\py-goicp
Complete output (73 lines):
Level 25:root:parsing progress 0 out of 1
INFO:root:start resolving decls
INFO:root:resolve_inheritance for POINT3D
INFO:root:resolve_inheritance for ROTNODE
INFO:root:resolve_inheritance for TRANSNODE
INFO:root:resolve_inheritance for GoICP
INFO:root:resolve class decl POINT3D
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl: void POINT3D ([])'
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl: void POINT3D
(['float ', 'float ', 'float '])'
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl: void
pointToString ([])'
INFO:root:resolve class decl ROTNODE
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl: void ROTNODE ([])'
INFO:root:resolve class decl TRANSNODE
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl: void TRANSNODE
([])'
INFO:root:resolve class decl GoICP
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl: void GoICP ([])'
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl: float Register
([])'
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl: void BuildDT ([])'
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl:
libcpp_vector[libcpp_vector[double]] optimalRotation ([])'
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl:
libcpp_vector[double] optimalTranslation ([])'
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl: void
loadModelAndData (['int ', 'libcpp_vector[POINT3D] ', 'int ',
'libcpp_vector[POINT3D] '])'
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl: void
setInitNodeRot (['ROTNODE & '])'
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl: void
setInitNodeTrans (['TRANSNODE & '])'
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl: void
setDTSizeAndFactor (['int ', 'double '])'
INFO:root:register <autowrap.ConversionProvider.IntegerConverter object at
0x000002261C272F40>
INFO:root:register <autowrap.ConversionProvider.FloatConverter object at
0x000002261CD37A00>
INFO:root:register <autowrap.ConversionProvider.DoubleConverter object at
0x000002261CD379A0>
INFO:root:register <autowrap.ConversionProvider.ConstCharPtrConverter
object at 0x000002261CD80160>
INFO:root:register <autowrap.ConversionProvider.CharPtrConverter object at
0x000002261CD807F0>
INFO:root:register <autowrap.ConversionProvider.CharConverter object at
0x000002261CD80FA0>
INFO:root:register <autowrap.ConversionProvider.StdStringConverter object
at 0x000002261CD902B0>
INFO:root:register <autowrap.ConversionProvider.StdStringUnicodeConverter
object at 0x000002261CD90880>
INFO:root:register
<autowrap.ConversionProvider.StdStringUnicodeOutputConverter object at
0x000002261CD908E0>
INFO:root:register <autowrap.ConversionProvider.StdVectorConverter object
at 0x000002261CD90940>
INFO:root:register <autowrap.ConversionProvider.StdSetConverter object at
0x000002261CD909A0>
INFO:root:register <autowrap.ConversionProvider.StdMapConverter object at
0x000002261CD90A00>
INFO:root:register <autowrap.ConversionProvider.StdPairConverter object at
0x000002261CD90A60>
INFO:root:register <autowrap.ConversionProvider.VoidConverter object at
0x000002261CD90AC0>
INFO:root:register <autowrap.ConversionProvider.SharedPtrConverter object
at 0x000002261CD90B20>
INFO:root:register <autowrap.ConversionProvider.TypeToWrapConverter object
at 0x000002261CD90BB0>
INFO:root:register <autowrap.ConversionProvider.TypeToWrapConverter object
at 0x000002261CD90C10>
INFO:root:register <autowrap.ConversionProvider.TypeToWrapConverter object
at 0x000002261CD90C70>
INFO:root:register <autowrap.ConversionProvider.TypeToWrapConverter object
at 0x000002261CD90CD0>
INFO:root:Create foreign imports for module
C:\Users\19707\AppData\Local\Temp\pip-install-7d74ami2\py-goicp\src\py_goicp.pyx
INFO:root:create wrapper for class GoICP
INFO:root: create wrapper for non overloaded constructor *init*
INFO:root: create wrapper for Register ('float Register()')
INFO:root: create wrapper for BuildDT ('void BuildDT()')
INFO:root: create wrapper for optimalRotation
('libcpp_vector[libcpp_vector[double]] optimalRotation()')
INFO:root: create wrapper for optimalTranslation ('libcpp_vector[double]
optimalTranslation()')
INFO:root: create wrapper for loadModelAndData ('void
loadModelAndData(int, libcpp_vector[POINT3D], int, libcpp_vector[POINT3D])')
INFO:root: create wrapper for setInitNodeRot ('void setInitNodeRot(ROTNODE
&)')
INFO:root: create wrapper for setInitNodeTrans ('void
setInitNodeTrans(TRANSNODE &)')
INFO:root: create wrapper for setDTSizeAndFactor ('void
setDTSizeAndFactor(int, double)')
INFO:root:create wrapper for class POINT3D
INFO:root: create wrapper for non overloaded constructor _init_0
INFO:root: create wrapper for non overloaded constructor _init_1
INFO:root: create wrapper decl for overloaded method *init*
INFO:root: create wrapper for pointToString ('void pointToString()')
INFO:root:create wrapper for class ROTNODE
INFO:root: create wrapper for non overloaded constructor *init*
INFO:root:create wrapper for class TRANSNODE
INFO:root: create wrapper for non overloaded constructor *init*
Traceback (most recent call last):
File "", line 1, in
File
"C:\Users\19707\AppData\Local\Temp\pip-install-7d74ami2\py-goicp\setup.py",
line 66, in
long_description=open('README.md').read(),
File "C:\Users\19707\miniconda3\lib\encodings\cp1252.py", line 23, in
decode
return codecs.charmap_decode(input,self.errors,decoding_table)[0]
UnicodeDecodeError: 'charmap' codec can't decode byte 0x9d in position
3658: character maps to
FOUND AUTOWRAP LIBRARY, PROCEED
PRECOMPILE USING AUTOWRAP BEFORE PROCEEDING
Autowrap has wrapped 4 classes, 13 methods and 0 enums
----------------------------------------
ERROR: Command errored out with exit status 1: python setup.py egg_info
Check the logs for full command output.
*Manual Compile:*
python setup.py build_ext --inplace
FOUND AUTOWRAP LIBRARY, PROCEED
PRECOMPILE USING AUTOWRAP BEFORE PROCEEDING
Level 25:root:parsing progress 0 out of 1
INFO:root:start resolving decls
INFO:root:resolve_inheritance for POINT3D
INFO:root:resolve_inheritance for ROTNODE
INFO:root:resolve_inheritance for TRANSNODE
INFO:root:resolve_inheritance for GoICP
INFO:root:resolve class decl POINT3D
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl: void POINT3D ([])'
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl: void POINT3D
(['float ', 'float ', 'float '])'
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl: void
pointToString ([])'
INFO:root:resolve class decl ROTNODE
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl: void ROTNODE ([])'
INFO:root:resolve class decl TRANSNODE
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl: void TRANSNODE
([])'
INFO:root:resolve class decl GoICP
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl: void GoICP ([])'
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl: float Register
([])'
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl: void BuildDT ([])'
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl:
libcpp_vector[libcpp_vector[double]] optimalRotation ([])'
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl:
libcpp_vector[double] optimalTranslation ([])'
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl: void
loadModelAndData (['int ', 'libcpp_vector[POINT3D] ', 'int ',
'libcpp_vector[POINT3D] '])'
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl: void
setInitNodeRot (['ROTNODE & '])'
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl: void
setInitNodeTrans (['TRANSNODE & '])'
INFO:root:resolve method decl: 'CppMethodOrFunctionDecl: void
setDTSizeAndFactor (['int ', 'double '])'
INFO:root:register <autowrap.ConversionProvider.IntegerConverter object at
0x00000164DE7FEFD0>
INFO:root:register <autowrap.ConversionProvider.FloatConverter object at
0x00000164DDE122B0>
INFO:root:register <autowrap.ConversionProvider.DoubleConverter object at
0x00000164DE813040>
INFO:root:register <autowrap.ConversionProvider.ConstCharPtrConverter
object at 0x00000164DE99B760>
INFO:root:register <autowrap.ConversionProvider.CharPtrConverter object at
0x00000164DE99BDF0>
INFO:root:register <autowrap.ConversionProvider.CharConverter object at
0x00000164DE9AA640>
INFO:root:register <autowrap.ConversionProvider.StdStringConverter object
at 0x00000164DE9AA910>
INFO:root:register <autowrap.ConversionProvider.StdStringUnicodeConverter
object at 0x00000164DE9AAEE0>
INFO:root:register
<autowrap.ConversionProvider.StdStringUnicodeOutputConverter object at
0x00000164DE9AAF40>
INFO:root:register <autowrap.ConversionProvider.StdVectorConverter object
at 0x00000164DE9AAFA0>
INFO:root:register <autowrap.ConversionProvider.StdSetConverter object at
0x00000164DE9BD040>
INFO:root:register <autowrap.ConversionProvider.StdMapConverter object at
0x00000164DE9BD0A0>
INFO:root:register <autowrap.ConversionProvider.StdPairConverter object at
0x00000164DE9BD100>
INFO:root:register <autowrap.ConversionProvider.VoidConverter object at
0x00000164DE9BD160>
INFO:root:register <autowrap.ConversionProvider.SharedPtrConverter object
at 0x00000164DE9BD1C0>
INFO:root:register <autowrap.ConversionProvider.TypeToWrapConverter object
at 0x00000164DE9BD250>
INFO:root:register <autowrap.ConversionProvider.TypeToWrapConverter object
at 0x00000164DE9BD2B0>
INFO:root:register <autowrap.ConversionProvider.TypeToWrapConverter object
at 0x00000164DE9BD310>
INFO:root:register <autowrap.ConversionProvider.TypeToWrapConverter object
at 0x00000164DE9BD370>
INFO:root:Create foreign imports for module
C:\Users\19707\Desktop\go-icp_cython-master\src\py_goicp.pyx
INFO:root:create wrapper for class GoICP
INFO:root: create wrapper for non overloaded constructor *init*
INFO:root: create wrapper for Register ('float Register()')
INFO:root: create wrapper for BuildDT ('void BuildDT()')
INFO:root: create wrapper for optimalRotation
('libcpp_vector[libcpp_vector[double]] optimalRotation()')
INFO:root: create wrapper for optimalTranslation ('libcpp_vector[double]
optimalTranslation()')
INFO:root: create wrapper for loadModelAndData ('void
loadModelAndData(int, libcpp_vector[POINT3D], int, libcpp_vector[POINT3D])')
INFO:root: create wrapper for setInitNodeRot ('void setInitNodeRot(ROTNODE
&)')
INFO:root: create wrapper for setInitNodeTrans ('void
setInitNodeTrans(TRANSNODE &)')
INFO:root: create wrapper for setDTSizeAndFactor ('void
setDTSizeAndFactor(int, double)')
INFO:root:create wrapper for class POINT3D
INFO:root: create wrapper for non overloaded constructor _init_0
INFO:root: create wrapper for non overloaded constructor _init_1
INFO:root: create wrapper decl for overloaded method *init*
INFO:root: create wrapper for pointToString ('void pointToString()')
INFO:root:create wrapper for class ROTNODE
INFO:root: create wrapper for non overloaded constructor *init*
INFO:root:create wrapper for class TRANSNODE
INFO:root: create wrapper for non overloaded constructor *init*
Autowrap has wrapped 4 classes, 13 methods and 0 enums
running build_ext
building 'py_goicp' extension
C:\Program Files (x86)\Microsoft Visual
Studio\2019\BuildTools\VC\Tools\MSVC\14.27.29110\bin\HostX86\x64\cl.exe /c
/nologo /Ox /W3 /GL /DNDEBUG /MD
-IC:\Users\19707\miniconda3\envs\connor\lib\site-packages\autowrap\data_files\autowrap
-IC:\Users\19707\miniconda3\envs\connor\lib\site-packages\autowrap\data_files
-IC:\Users\19707\miniconda3\envs\connor\include
-IC:\Users\19707\miniconda3\envs\connor\include "-IC:\Program Files
(x86)\Microsoft Visual
Studio\2019\BuildTools\VC\Tools\MSVC\14.27.29110\include" /EHsc
/Tpsrc/py_goicp.cpp /Fobuild\temp.win-amd64-3.8\Release\src/py_goicp.obj
-std=c++14
cl : Command line warning D9002 : ignoring unknown option '-std=c++14'
py_goicp.cpp
C:\Users\19707\miniconda3\envs\connor\include\pyconfig.h(59): fatal error
C1083: Cannot open include file: 'io.h': No such file or directory
error: command 'C:\Program Files (x86)\Microsoft Visual
Studio\2019\BuildTools\VC\Tools\MSVC\14.27.29110\bin\HostX86\x64\cl.exe'
failed with exit status 2
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Alright thank you so much for the suggestions, I will give them a try tomorrow and let you know. Thanks again for the support, I appreciate you taking the time to help. |
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No worries and you are welcome the most. I will login to my Windows system
tomorrow. Let me know if you still have any issues and I will see what I
can do to help.
Regards,
#0K
…On Tue, Aug 11, 2020, 11:08 PM Connor Hazen ***@***.***> wrote:
Alright thank you so much for the suggestions, I will give them a try
tomorrow and let you know. Thanks again for the support, I appreciate you
taking the time to help.
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I am still getting the same error. Can you please suggest to me how to solve this? |
No description provided.
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