modified one example

R/Help_Func.R

@@ -645,7 +645,7 @@ interaction_gen <- function(type = "lm", covariates = NULL, smooth = NULL, inter
 #'
 #' @examples
 #' result <- visual_prep(type = "lm", features = "thickness.left.cuneus",
-#' batch = "manufac", covariates = "AGE", df = adni, mdmr = FALSE, cores = 1)
+#' batch = "manufac", covariates = "AGE", df = adni[1:100, ], mdmr = FALSE, cores = 1)
 #' temp_dir <- tempfile()
 #' dir.create(temp_dir)
 #' diag_save(temp_dir, result)

codemeta.json

@@ -2,13 +2,13 @@
   "@context": "https://doi.org/10.5063/schema/codemeta-2.0",
   "@type": "SoftwareSourceCode",
   "identifier": "ComBatFamQC",
-  "description": "Provides a comprehensive framework for batch effect diagnostics, harmonization, and post-harmonization downstream analysis. Features include interactive visualization tools, robust statistical tests, and a range of harmonization techniques. Additionally, ComBatFamQC enables the creation of life-span age trend plots with estimated age-adjusted centiles and facilitates the generation of covariate-corrected residuals for analytical purposes.",
+  "description": "Provides a comprehensive framework for batch effect diagnostics, harmonization, and post-harmonization downstream analysis. Features include interactive visualization tools, robust statistical tests, and a range of harmonization techniques. Additionally, 'ComBatFamQC' enables the creation of life-span age trend plots with estimated age-adjusted centiles and facilitates the generation of covariate-corrected residuals for analytical purposes. Methods for harmonization are based on approaches described in Johnson et al., (2007) <doi:10.1093/biostatistics/kxj037>, Beer et al., (2020) <doi:10.1016/j.neuroimage.2020.117129>, Pomponio et al., (2020) <doi:10.1016/j.neuroimage.2019.116450>, and Chen et al., (2021) <doi:10.1002/hbm.25688>.",
   "name": "ComBatFamQC: Comprehensive Batch Effect Diagnostics and Harmonization",
   "relatedLink": "https://zheng206.github.io/ComBatQC-Web/",
   "codeRepository": "https://github.com/Zheng206/ComBatFamQC",
   "issueTracker": "https://github.com/Zheng206/ComBatFamQC/issues",
   "license": "https://spdx.org/licenses/MIT",
-  "version": "1.0.0",
+  "version": "1.0.1",
   "programmingLanguage": {
     "@type": "ComputerLanguage",
     "name": "R",
@@ -423,7 +423,7 @@
     },
     "SystemRequirements": null
   },
-  "fileSize": "4969.12KB",
+  "fileSize": "4966.528KB",
   "releaseNotes": "https://github.com/Zheng206/ComBatFamQC/blob/master/NEWS.md",
   "readme": "https://github.com/Zheng206/ComBatFamQC/blob/main/README.md",
   "contIntegration": ["https://github.com/Zheng206/ComBatFamQC/actions/workflows/R-CMD-check.yaml", "https://app.codecov.io/gh/Zheng206/ComBatFamQC"],