Creating an automated nextflow workflow to analyze & compare genome sequences of sibling nematodes. As of 7/27/2023, individual nextflow scripts have been written to evaluate sequence qualities with FastQC, index a reference genome with BWA, align to an indexed reference genome with BWA, and convert aligned .sam files to a .bam format with samtools, respectively.
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Creating an automated nextflow workflow to analyze & compare genome sequences of sibling nematodes.
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