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28 Open 36 Closed
28 Open 36 Closed
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Issues list

ShapeMapper QC Fail
#66 opened Mar 10, 2025 by camdenbair
1
Profile PDF mutation rate axes extend to extremes - difficult to interpret.
#64 opened Mar 5, 2025 by jwaldern
Unsupported Operand Error
#63 opened Feb 9, 2025 by jainronit
4
Error: Unable to determine variant sequence. Conflicting (overlapping) variant sequences present.
#62 opened Jan 23, 2025 by sidsrivastava001
1
--pernt-norm-factor-threshold for short RNAs and --dms option
#61 opened Jan 22, 2025 by irinatu
4
Maximum Recursion Depth Exceeded Issue
#60 opened Dec 28, 2024 by jainronit
5
Mutation rates (Modified vs. denatured)
#59 opened Dec 12, 2024 by AMA-cs
3
CalcProfile numpy error on HPC cluster
#58 opened Oct 10, 2024 by DollyCM
ERROR: for component MutationParser, 'primers' node not linked to a filename or parameter
#57 opened Aug 28, 2024 by nnguyenuab
Modular Workflow: Error CIGAR string incorrectly formatted
#56 opened Aug 19, 2024 by Adele-Mangelinck
Component "Interleaver" (sample:Modified) failed
#55 opened Jun 23, 2024 by Li-Li-RNA
5
Histogram PDFs do not accurately represent mutation rate statistics if a target sequence longer than the amplicon is provided
#52 opened Apr 11, 2024 by jwaldern
1
nanoSHAPE
#51 opened Mar 27, 2024 by peterkilfeather
ERROR: Component "BowtieIndexBuilder" failed
#50 opened Feb 5, 2024 by yinglin1202
maximum recursion depth exceeded while calling a Python object
#48 opened Sep 28, 2023 by doudou0908
Output reactivity for entire transcriptome
#47 opened Aug 14, 2023 by reislab
4
masking the primers in shape reactivity profile
#41 opened Feb 1, 2023 by gunjangunjan22
4
Shapemapper2 installation issue on oracle linux
#40 opened Jan 10, 2023 by GunjanVasudeva22
1
Low alignment percentage
#39 opened Jan 4, 2023 by herber4
1
Profile figure is not created for long sequence with no error.
#34 opened Aug 18, 2022 by Psirving
Component "Tab6Interleaver" (sample:Modified) failed
#26 opened Dec 14, 2021 by SooLee
1
OS/pipeline troubles
#20 opened Nov 5, 2020 by benoahb
2
bbmap 38.x version :: error
#18 opened Aug 18, 2020 by EricDeveaud
DeprecationWarning: 'U' mode is deprecated
#17 opened Aug 18, 2020 by EricDeveaud
Error: must provide at least one target sequence
#14 opened Mar 16, 2020 by s-t-calus
15
ProTip! Exclude everything labeled bug with -label:bug.