Skip to content

Commit

Permalink
Added slice time correction option to preprocessing.
Browse files Browse the repository at this point in the history
  • Loading branch information
astigliani committed Aug 10, 2018
1 parent 06ac68f commit da0bc9b
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -332,8 +332,8 @@ To analyze fMRI data from the localizer experiment using functions from [vistaso
9. To view a parameter map overlaid on the subject's anatomy:
1. Navigate the to the appropriate session directory in `~/fLoc/data/`.
2. Enter `mrVista` in the command line to open a vistasoft inplane view.
3. Change the *Data type* (upper-right menu in GUI) from *Original* to *GLMs*.
4. Select *Load parameter map* from the *File* menu and select a `.mat` file from the session GLMs directory (e.g., `~/fLoc/data/s01/Inplane/GLMs/face_vs_all.mat`).
3. Change the *Data Type* (upper-right menu in GUI) from *Original* to *GLMs*.
4. Click *File -> Parameter Map -> Load Parameter Map* and select a `.mat` file from the session GLMs directory (e.g., `~/fLoc/data/s01/Inplane/GLMs/face_vs_all.mat`).

*Note for VPNL users:* If analyzing MUX data from the CNI, always clip 2 TRs from beginning of each run. For non-MUX data, clip (countdown duration)/(TR duration) TRs from each run. In both cases, stimulus parameter files begin at the end of the countdown.

Expand Down

0 comments on commit da0bc9b

Please sign in to comment.