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Comet v2023.01.2
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@jke000 jke000 released this 30 Mar 19:38
· 123 commits to master since this release
v2023.01.2
7c9150d

This release addresses these two issues:

  • mzML/mzXML files without the optional scan index would not be searched because their spectra could not be read. Support for this functionality was implemented in v2019.01.4 thru v2022.01.1 but was lost as of v2022.01.2 when MSToolkit code was updated from that library's repository. This functionality is re-implemented in this release. Thanks to J. Wang for reporting the issue.
  • A parameter "export_additional_pepxml_scores" has been implemented. This is an optional/hidden parameter in that it is not written by default in the comet.params files; it needs to be added manually. When this parameter is present and it's value set to "1", additional search scores (lnrSp, deltLCn, lnExpect, and IonFrac) are reported in the pep.xml output. Feature request by J. Scheid, OpenMS group.
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