changing layout to yaml and fixing slurm resource request

SchlossLab · Oct 29, 2019 · 282060f · 282060f
1 parent 2b4f403
commit 282060f
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Showing 2 changed files with 17 additions and 28 deletions.
diff --git a/config/slurm/cluster.json b/config/slurm/cluster.json
diff --git a/config/slurm/cluster.yaml b/config/slurm/cluster.yaml
@@ -0,0 +1,17 @@
+__default__:
+  jobname: "{rule}.{wildcards}"
+  nodes: 1
+  ntaskspernode: 1
+  cpuspertask: 1
+  mem: "1000mb"
+  time: "5:00"
+  account: "ACCOUNT"
+  partition: "standard"
+  mailuser: "EMAIL"
+  mailtype: "BEGIN,END,FAIL"
+  output: "code/log/%x-%j.out"
+
+count_words:
+  cpuspertask: 2
+  mem: "2000mb"
+  time: "10:00"